Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025356.1 Length=11097 Score E Sequences producing significant alignments: (Bits) Value seq1480 111 1e-20 seq1774 105 5e-19 seq1107 105 5e-19 seq1594 100 2e-17 >seq1480 Length=8353993 Score = 111 bits (122), Expect = 1e-20 Identities = 257/382 (67%), Gaps = 9/382 (2%) Strand=Plus/Minus Query 6529 ATCGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAATCCAATGGG 6588 ||||| ||||||||||| ||||| || ||||| || ||| |||| ||| ||| | Sbjct 8252950 ATCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTCC 8252891 Query 6589 CCTGTGTTTCGAGTCATGGGGCAGTTTTTGGGTTATCCCAGATTGTTTGAAAGAACCCAT 6648 || || || ||| || ||||| ||||| || || | | || | | || ||| Sbjct 8252890 CCCGTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCAT 8252831 Query 6649 GAGTTTTTTGAATCAAGCCTCATTTACTACAACGGCAGACCAGACTTGATGGATGT--AA 6706 || || |||||| | | || || || | | | ||||| | || | || || Sbjct 8252830 GAATTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGGTCGAA 8252771 Query 6707 GAGGAGAT--TCGTTGATCAATACCACTGAAAAGTTGGTGTGTTGGGAGGGTCAGGCGGG 6764 || | | | ||| || ||| | |||| | || |||||||| | || ||||| || Sbjct 8252770 GATGGGGTGGTCGCGAATGTGGACC-CGGAAAGGATGATGTGTTGGAATGGACAGGCCGG 8252712 Query 6765 AGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGTGCTGAATCTGTTAGTCATAAACAG 6824 |||| | ||||| |||||||||||||| |||||||| || ||| | || || || | || Sbjct 8252711 AGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAATCGAGAG 8252652 Query 6825 GGAATCATCCATAAGAAATACAATCGTG--AAAGTACTAGCGCAGGGAGACAATCAGGTC 6882 ||| ||| ||| | || || | ||| | || |||| ||||| |||||||||||| Sbjct 8252651 GGAGTCACGCATTCGTAACACTAAGGTGCTCACGT--TAGCTCAGGGTGACAATCAGGTC 8252594 Query 6883 ATCTGTACTCAATATAAAACAA 6904 || || ||| ||| | |||| Sbjct 8252593 ATTTGCACTGTGTATCAGACAA 8252572 >seq1774 Length=2904822 Score = 105 bits (116), Expect = 5e-19 Identities = 308/465 (66%), Gaps = 12/465 (3%) Strand=Plus/Minus Query 6343 GGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTAC 6402 || ||||| ||| || ||||| | ||| | || ||||| | |||||| |||| || | Sbjct 1686494 GGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGAGAGTTTTTTGTGGTCACAGAACAT 1686435 Query 6403 TTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACA 6462 || || || || || ||||| ||||| ||| | || ||||| ||||| || || | | Sbjct 1686434 TTGATCAAAACCCACTATGTTCCATTGTTCCACGGGCTCACCATGGCAGACGACCACAAT 1686375 Query 6463 TCAGTTGTAAAGAAGATGTTGGACAACACGAATGGACAAGGACTGGATGATTATTC-ATC 6521 |||| || |||||||| | | || | | | | || || | || | | | | Sbjct 1686374 ACAGTGATAGAGAAGATGCTCG-CAGCTTCAGATGCCCAGAACCCG--GAAGACCCGAAC 1686318 Query 6522 GATTTGCAT--CGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAA 6579 | | || ||| |||||| | || || ||||||||||| || ||| || ||| Sbjct 1686317 CAAGTAAATTACGCGAATCACCTGGATTACTCAAAGTGGAATAACCACCAGCGAGGAGAG 1686258 Query 6580 TCCAATGGGCCTGTGTTTCGAGTCATGGGGCAGTTTTTGGGTTATCCCAGATTGTTTGAA 6639 | || | || |||||| | |||||||| || || |||| || | |||| Sbjct 1686257 GCGAACGACCCGGTGTTTAGGGTCATGGGTCAATTCCTGGGGCTCCCGAACCTGTTCACT 1686198 Query 6640 AGAACCCATGAGTTTTTTGAATCAAGCCTCATTTACTACAACGGCAGACCAGACTTGATG 6699 | ||||||||||| || | | ||| | || ||||| | | | || ||| ||||| Sbjct 1686197 CGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTATTACAAAGACCGGCCGGACCTGATG 1686138 Query 6700 -GA-TGTAAGA-GGAGATTCGTTGATCAATACCACTGAAAAGTTGGTGTGTTGGGAGGGT 6756 || || || ||| | | | |||||| |||| ||||| | || || |||||||| Sbjct 1686137 AGAGTGGAATCTGGAAA---GGTCATCAATGCCACCGAAAACATCGTTTGCTGGGAGGGC 1686081 Query 6757 CAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGTG 6801 || || || ||| ||||||| | |||| || |||||||||||| Sbjct 1686080 CAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGATGGAGTGTG 1686036 >seq1107 Length=3620151 Score = 105 bits (116), Expect = 5e-19 Identities = 308/465 (66%), Gaps = 12/465 (3%) Strand=Plus/Minus Query 6343 GGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTAC 6402 || ||||| ||| || ||||| | ||| | || ||||| | |||||| |||| || | Sbjct 2215002 GGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGAGAGTTTTTTGTGGTCACAGAACAT 2214943 Query 6403 TTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACA 6462 || || || || || ||||| ||||| ||| | || ||||| ||||| || || | | Sbjct 2214942 TTGATCAAAACCCACTATGTTCCATTGTTCCACGGGCTCACCATGGCAGACGACCACAAT 2214883 Query 6463 TCAGTTGTAAAGAAGATGTTGGACAACACGAATGGACAAGGACTGGATGATTATTC-ATC 6521 |||| || |||||||| | | || | | | | || || | || | | | | Sbjct 2214882 ACAGTGATAGAGAAGATGCTCG-CAGCTTCAGATGCCCAGAACCCG--GAAGACCCGAAC 2214826 Query 6522 GATTTGCAT--CGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAA 6579 | | || ||| |||||| | || || ||||||||||| || ||| || ||| Sbjct 2214825 CAAGTAAATTACGCGAATCACCTTGATTACTCAAAGTGGAATAACCACCAGCGAGGAGAG 2214766 Query 6580 TCCAATGGGCCTGTGTTTCGAGTCATGGGGCAGTTTTTGGGTTATCCCAGATTGTTTGAA 6639 | || | || |||||| | |||||||| || || |||| || | |||| Sbjct 2214765 GCGAACGACCCGGTGTTTAGGGTCATGGGTCAATTCCTGGGGCTCCCGAACCTGTTCACT 2214706 Query 6640 AGAACCCATGAGTTTTTTGAATCAAGCCTCATTTACTACAACGGCAGACCAGACTTGATG 6699 | ||||||||||| || | | ||| | || ||||| | | | || ||| ||||| Sbjct 2214705 CGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTATTACAAAGACCGGCCGGACCTGATG 2214646 Query 6700 -GA-TGTAAGA-GGAGATTCGTTGATCAATACCACTGAAAAGTTGGTGTGTTGGGAGGGT 6756 || || || ||| | | | |||||| |||| ||||| | || || |||||||| Sbjct 2214645 AGAGTGGAATCTGGAAA---GGTCATCAATGCCACCGAAAACATCGTTTGCTGGGAGGGC 2214589 Query 6757 CAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGTG 6801 || || || ||| ||||||| | |||| || |||||||||||| Sbjct 2214588 CAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGATGGAGTGTG 2214544 >seq1594 Length=5600000 Score = 100 bits (110), Expect = 2e-17 Identities = 315/476 (66%), Gaps = 24/476 (5%) Strand=Plus/Plus Query 6343 GGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTAC 6402 || |||||||| | ||||| | ||| || | | || | || || |||||||| || Sbjct 3582733 GGCAGATTCTTCGCAATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCAC 3582792 Query 6403 TTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATC-TGAC 6461 |||| ||||| || ||||| || || || | || || || ||||| || || | | || Sbjct 3582793 CTAATCAAGACCCACTATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAAC 3582852 Query 6462 ATCAGTTGTAAAGAAGATGTTGGACAACACGAATGGACAAGGACTGGATGATTATTCATC 6521 | | || | |||||||||| | | | ||| |||| | || ||| || | Sbjct 3582853 ACC-GTGATCGAGAAGATGTTAGCTGCCTCCGATGCACAAAATCCAGAGGATCC--CAAC 3582909 Query 6522 GATTTGCATC---GCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGA 6578 | | || | || || ||| | ||||| || ||||| || ||||| || ||| Sbjct 3582910 CAGGT-CAACTATGCTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGA 3582968 Query 6579 ATCCAATGGGCCTGTGTTTCGAGTCATGGGGCAGTTTTTGGGTTATCCCAGATT-GTTTG 6637 | |||||| |||||||| || ||||| || ||||||||| ||||| ||| |||| Sbjct 3582969 AGCCAATGACCCTGTGTTCAAGGTGATGGGCCAATTTTTGGGTC-TCCCAAATTTGTTTA 3583027 Query 6638 AAAGAACCCATGAGTTTTTT--GAA-TCAAGCCTCATTTACTACAACGGCAGACCAGACT 6694 |||| || ||||| ||| ||| || ||| || |||||||| | ||||||||| Sbjct 3583028 CTCGAACTCACGAGTTCTTTCGGAAGTC---CCTGATCTACTACAAAGATAGACCAGACC 3583084 Query 6695 TGATGGATGTAAGA----GGAGATTCGTTGATCAATACCACTGAAAAGTTGGTGTGTTGG 6750 | ||| || | ||| | || || ||| | || ||| | | || |||||| Sbjct 3583085 TCATGAGGGTTGAATCCGGGAAAGTC----ATAAATGCAACAGAACATATCGTTTGTTGG 3583140 Query 6751 GAGGGTCAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGTGCTGAA 6806 |||| || || || || | || || || | |||||||||||||| || |||| Sbjct 3583141 AAGGGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAA 3583196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35394230392740