Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025358.1 Length=15024 Score E Sequences producing significant alignments: (Bits) Value seq1480 102 8e-18 >seq1480 Length=8353993 Score = 102 bits (112), Expect = 8e-18 Identities = 243/364 (67%), Gaps = 15/364 (4%) Strand=Plus/Minus Query 10372 TAACTATTGCAAACAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTA 10431 ||||||| || || |||||||||||||||||||||| || | |||||| | |||| | | Sbjct 8252955 TAACTATCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCA 8252896 Query 10432 ACGGTCCAGTATTTACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAA 10491 || || || || || || || ||||||| || ||||||||||| || | | | Sbjct 8252895 CTTCCCCCGTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCA 8252836 Query 10492 CTCATGAATTCTTCCAAAAAAGCTTGATTTATTATAACCAAAGGCCTGATTTAATGATGG 10551 | ||||||||||| ||||| || || |||||| | | || ||| |||| | || Sbjct 8252835 CGCATGAATTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGG 8252776 Query 10552 T--GAGAGGTAATGAATGTCTCAACAAATCTGGA---GTAAAAG----TATGTTGGGAGG 10602 | ||| | || ||| | ||| |||| | ||| | | |||||| | | Sbjct 8252775 TCGAAGATGGGGTG---GTC---GCGAATGTGGACCCGGAAAGGATGATGTGTTGGAATG 8252722 Query 10603 GCCAAAAAGGGGGTTTGGAGGGACTAAGACAAAAAGGATGGAGTATTTTAAATTATTTGA 10662 | || || || | || || | ||||||||||| |||||| || | |||| ||| Sbjct 8252721 GACAGGCCGGAGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGG 8252662 Query 10663 TGATTGAAAGAGAGAGCAGGATTCGAAATACAAAGGTCAAAATATTGGCACAGGGGGATA 10722 | || || || ||| | ||||| || || ||||| | || || ||||| || | Sbjct 8252661 TAATCGAGAGGGAGTCACGCATTCGTAACACTAAGGTGCTCACGTTAGCTCAGGGTGACA 8252602 Query 10723 ATCA 10726 |||| Sbjct 8252601 ATCA 8252598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47957049746235