Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025364.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq1107 138 8e-29 seq1774 132 3e-27 seq1480 122 6e-24 >seq1107 Length=3620151 Score = 138 bits (152), Expect = 8e-29 Identities = 512/788 (65%), Gaps = 16/788 (2%) Strand=Plus/Minus Query 5892 ACTTGGCCGACTCCGGCCGCCATCCAGGATTTCGGAGACAAATGGCACTTACTTCCTCTT 5951 || |||||| | |||| ||||||| | ||||||| |||||| ||| || || Sbjct 2215326 ACCTGGCCGTCCGCGGCAAGGATCCAGGCGGTGGGAGACATTTGGCACAAACTCCCACTG 2215267 Query 5952 ATTCAGTGCTTCGACATTCCGGATCTAATCGATCCCTCTATTATTTACTCGGACAAGAGT 6011 |||||||||||||| |||||||| || || || ||||||| || | || ||| | Sbjct 2215266 ATTCAGTGCTTCGATGTTCCGGATTATATTGACCCGACTATTATCTATGCAGATAAGCAT 2215207 Query 6012 CATTCAATGAACAGAAGAGATGTGATCAATCACATTAAGAAACATCCAGACAAACCAATA 6071 ||||| ||| ||||| ||| ||| | |||||||| |||| | || | | | || || Sbjct 2215206 CATTCCATGGGCAGAACAGAGGTGTTGAATCACATAGAGAATCGACCGGGCCAGCCGATT 2215147 Query 6072 CCAAGCAAAAAAGTCCTCAAAACGATGATTGATCAAC-CAG-CTACCAACTGGCTAGAAT 6129 || | || || |||| || | |||| || | || |||||| || | Sbjct 2215146 CCCTCTCGATCGGTACTGGAAACCTACAT--AGCAACTGAGCCCACAAACTGGAGCGACT 2215089 Query 6130 TTCTA-GAGGAGATAGATAAAAACGGACTACCTCTAGATGATTTAGTCATCGGCTTAAAA 6188 ||||| || ||| | | | ||||||| || || | || || |||| | || | Sbjct 2215088 TTCTACGAAGAG-TGAACGACTACGGACTTGATCCGGAGCAGTTGGTGATCGCCCTACGA 2215030 Query 6189 GGCAAGGAAAGAGA-ATTAAAAATAGCAGGTAGATTTTTCTCTCTCATGTCTTGGAAATT 6247 | ||||||| |||| || || | | || |||||||| | | ||| | ||| | | Sbjct 2215029 GCCAAGGAACGAGAGATCAAGGAGA-TGGGGAGATTTTTTGCCATGATGGCGTGGGAGCT 2214971 Query 6248 GAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGACACATTTTGTGCCTCTATTTCA 6307 || || | |||||| ||||||| | || || || || || | ||| || | || || Sbjct 2214970 TAGAGAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCA 2214911 Query 6308 TGGTCTCACCATGGCTGACGACATGACTGCAGTCATCAAAAAGATGTTGGAAAGCTCATC 6367 || ||||||||||| |||||| | | |||| || | |||||| | | | ||| Sbjct 2214910 CGGGCTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCGCAGCTTCAGA 2214851 Query 6368 TGGACAAGGTTTGTTAGATTACTCAGC-GGTATGCCTGGCCAACCATATAGATTATGAAA 6426 || || | ||| | | | ||| || || || | ||||| || Sbjct 2214850 TGCCCAGAACCCGGAAGA-CCCGAACCAAGTAAATTACGCGAATCACCTTGATTACTCAA 2214792 Query 6427 AATGGAACAATCACCAGCGAAAATTGTCAAACGGTCCTGTCTTCAAGGTCATGGGCCAAT 6486 | ||||| || ||||||||| | | | |||| || || || | ||||||||| |||| Sbjct 2214791 AGTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTCAAT 2214732 Query 6487 TCCTTGGGTTTCCGAATCTAATATACAGAACTCATGAATTTTTTGAGAAAAGCCTAATAT 6546 |||| ||| | ||||| || | | || ||||| || || ||||| ||| | | Sbjct 2214731 TCCTGGGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTTGTCT 2214672 Query 6547 ATTACAATGGCAGGCCTGATCTCATGAGAGTCAAAGATGACACTGTTGAAAATGCAGGCA 6606 ||||||| | | |||| || || |||||||| || || | || ||||| || Sbjct 2214671 ATTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAAAGGTCATCAATGC---CA 2214615 Query 6607 CC--ACTCA-GGTGTGCTGGAATGGGCAGGCAGGAGGCTTGGAAGGTCTTCGTCAAAAGG 6663 || | || || |||||| | || || || || || ||||||| || || || |||| Sbjct 2214614 CCGAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGG 2214555 Query 6664 GTTGGAGT 6671 | |||||| Sbjct 2214554 GATGGAGT 2214547 >seq1774 Length=2904822 Score = 132 bits (146), Expect = 3e-27 Identities = 511/788 (65%), Gaps = 16/788 (2%) Strand=Plus/Minus Query 5892 ACTTGGCCGACTCCGGCCGCCATCCAGGATTTCGGAGACAAATGGCACTTACTTCCTCTT 5951 || |||||| | |||| ||||||| | ||||||| |||||| ||| || || Sbjct 1686818 ACCTGGCCGTCCGCGGCAAGGATCCAGGCGGTGGGAGACATTTGGCACAAACTCCCACTG 1686759 Query 5952 ATTCAGTGCTTCGACATTCCGGATCTAATCGATCCCTCTATTATTTACTCGGACAAGAGT 6011 |||||||||||||| |||||||| || || || ||||||| || | || ||| | Sbjct 1686758 ATTCAGTGCTTCGATGTTCCGGATTATATTGACCCGACTATTATCTATGCAGATAAGCAT 1686699 Query 6012 CATTCAATGAACAGAAGAGATGTGATCAATCACATTAAGAAACATCCAGACAAACCAATA 6071 ||||| ||| ||||| ||| ||| | |||||||| |||| | || | | | || || Sbjct 1686698 CATTCCATGGGCAGAACAGAGGTGTTGAATCACATAGAGAATCGACCGGGCCAGCCGATT 1686639 Query 6072 CCAAGCAAAAAAGTCCTCAAAACGATGATTGATCAAC-CAG-CTACCAACTGGCTAGAAT 6129 || | || || |||| || | |||| || | || |||||| || | Sbjct 1686638 CCCTCTCGATCGGTACTGGAAACCTACAT--AGCAACTGAGCCCACAAACTGGAGCGACT 1686581 Query 6130 TTCTA-GAGGAGATAGATAAAAACGGACTACCTCTAGATGATTTAGTCATCGGCTTAAAA 6188 ||||| || ||| | | | |||| || || || | || || |||| | || | Sbjct 1686580 TTCTACGAAGAG-TGAACGACTACGGCCTTGATCCGGAGCAGTTGGTGATCGCCCTACGA 1686522 Query 6189 GGCAAGGAAAGAGA-ATTAAAAATAGCAGGTAGATTTTTCTCTCTCATGTCTTGGAAATT 6247 | ||||||| |||| || || | | || |||||||| | | ||| | ||| | | Sbjct 1686521 GCCAAGGAACGAGAGATCAAGGAGA-TGGGGAGATTTTTTGCCATGATGGCGTGGGAGCT 1686463 Query 6248 GAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGACACATTTTGTGCCTCTATTTCA 6307 || || | |||||| ||||||| | || || || || || | ||| || | || || Sbjct 1686462 TAGAGAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCA 1686403 Query 6308 TGGTCTCACCATGGCTGACGACATGACTGCAGTCATCAAAAAGATGTTGGAAAGCTCATC 6367 || ||||||||||| |||||| | | |||| || | |||||| | | | ||| Sbjct 1686402 CGGGCTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCGCAGCTTCAGA 1686343 Query 6368 TGGACAAGGTTTGTTAGATTACTCAGC-GGTATGCCTGGCCAACCATATAGATTATGAAA 6426 || || | ||| | | | ||| || || || | ||||| || Sbjct 1686342 TGCCCAGAACCCGGAAGA-CCCGAACCAAGTAAATTACGCGAATCACCTGGATTACTCAA 1686284 Query 6427 AATGGAACAATCACCAGCGAAAATTGTCAAACGGTCCTGTCTTCAAGGTCATGGGCCAAT 6486 | ||||| || ||||||||| | | | |||| || || || | ||||||||| |||| Sbjct 1686283 AGTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTCAAT 1686224 Query 6487 TCCTTGGGTTTCCGAATCTAATATACAGAACTCATGAATTTTTTGAGAAAAGCCTAATAT 6546 |||| ||| | ||||| || | | || ||||| || || ||||| ||| | | Sbjct 1686223 TCCTGGGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTTGTCT 1686164 Query 6547 ATTACAATGGCAGGCCTGATCTCATGAGAGTCAAAGATGACACTGTTGAAAATGCAGGCA 6606 ||||||| | | |||| || || |||||||| || || | || ||||| || Sbjct 1686163 ATTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAAAGGTCATCAATGC---CA 1686107 Query 6607 CC--ACTCA-GGTGTGCTGGAATGGGCAGGCAGGAGGCTTGGAAGGTCTTCGTCAAAAGG 6663 || | || || |||||| | || || || || || ||||||| || || || |||| Sbjct 1686106 CCGAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGG 1686047 Query 6664 GTTGGAGT 6671 | |||||| Sbjct 1686046 GATGGAGT 1686039 >seq1480 Length=8353993 Score = 122 bits (134), Expect = 6e-24 Identities = 253/375 (67%), Gaps = 5/375 (1%) Strand=Plus/Minus Query 6405 GCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCAAACGGTCCT 6464 || || || || |||||||||||||||||||| || ||| | | | | || Sbjct 8252947 GCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTCCCCC 8252888 Query 6465 GTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATACAGAACTCATGAA 6524 || |||| || || || ||||| |||| | || |||||| | | | || |||||| Sbjct 8252887 GTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCATGAA 8252828 Query 6525 TTTTTTGAGAAAAGCCTAATATATTACAATGGCAGGCCTGATCTCATGAGAGTCAAAGAT 6584 || ||||| ||| |||||||||| | | | || ||||| || | ||| ||||| Sbjct 8252827 TTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGGTCGAAGAT 8252768 Query 6585 GACACTGTTGAAAATGCAGGCACCACTCAGG----TGTGCTGGAATGGGCAGGCAGGAGG 6640 | || | |||| | | || ||| |||| |||||||| ||||| ||||| Sbjct 8252767 GGGGTGGTCGCGAATGTGGAC-CCGGAAAGGATGATGTGTTGGAATGGACAGGCCGGAGG 8252709 Query 6641 CTTGGAAGGTCTTCGTCAAAAGGGTTGGAGTATTCTAAATCTATTAGTGATTCAAAGGGA 6700 | ||||| | | ||||| || |||||| |||| ||| |||| || || | ||||| Sbjct 8252708 ACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAATCGAGAGGGA 8252649 Query 6701 GGCTAAAATTCGAAATACTGCAGTGAAAGTATTGGCTCAGGGAGACAATCAAGTCATTTG 6760 | | ||||| || ||| ||| || |||||||| |||||||| |||||||| Sbjct 8252648 GTCACGCATTCGTAACACTAAGGTGCTCACGTTAGCTCAGGGTGACAATCAGGTCATTTG 8252589 Query 6761 CACTCAGTATAAGAC 6775 |||| |||| |||| Sbjct 8252588 CACTGTGTATCAGAC 8252574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35144637230220