Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025376.1 Length=11096 Score E Sequences producing significant alignments: (Bits) Value seq1594 154 1e-33 seq1107 120 2e-23 seq1774 114 9e-22 seq1480 78.8 7e-11 >seq1594 Length=5600000 Score = 154 bits (170), Expect = 1e-33 Identities = 378/563 (67%), Gaps = 30/563 (5%) Strand=Plus/Plus Query 6342 GGAAGATTTTTCTCCCTAATGTCATGGCAGTTAAGGGAGTACTTCGTCATCACAGAGTAC 6401 || ||||| ||| | | ||| ||||| | || |||||| |||||| |||| ||| || Sbjct 3582733 GGCAGATTCTTCGCAATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCAC 3582792 Query 6402 TTGATCAAAACACACTATGTCCCGTTGTTCAAGGGACTGACGATGGCAGATGACCTTACA 6461 | ||||| || |||||||| || ||||| | || || || ||||| || |||| || Sbjct 3582793 CTAATCAAGACCCACTATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAAC 3582852 Query 6462 TCCGTTGTGAAGAAGATGTTGGACAACACAAATGGACAAGG---ATTGGATGACTAC--- 6515 |||| | |||||||||| | | | ||| |||| | |||| | || Sbjct 3582853 ACCGTGATCGAGAAGATGTTAGCTGCCTCCGATGCACAAAATCCAGAGGATCCCAACCAG 3582912 Query 6516 -TCCTCTATCTGTATTGCCAACCACATTGACTACGAAAAATGGAATAATCATCA--GAGG 6572 || |||| || |||||| | |||||| |||||||| || ||||| |||| Sbjct 3582913 GTCAACTAT-------GCTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGG 3582965 Query 6573 AAAGAGTCTAATGGTCCAGTGTTTCGAGTAATGGGACAGTTTCTAGGGTATCCTAGACT- 6631 | | || | |||| || ||||| || ||||| || ||| | |||| ||| | | | Sbjct 3582966 AGA-AGCC-AATGACCCTGTGTTCAAGGTGATGGGCCAATTTTT-GGGTCTCCCAAATTT 3583022 Query 6632 GTTTGAAAGGACACATGAGTTCTTTG---AGTCCAGCCTCATCTACTACAATGGAAGACC 6688 |||| | || || ||||||||| ||||| || ||||||||||| | ||||| Sbjct 3583023 GTTTACTCGAACTCACGAGTTCTTTCGGAAGTCC---CTGATCTACTACAAAGATAGACC 3583079 Query 6689 AGACCTGATGGATGTGAGAG--GGGATTCATTGATCAACACTACAGACAAATTAGTGTGT 6746 |||||| ||| || | |||| | | || || | ||||| | | || ||| Sbjct 3583080 AGACCTCATGAGGGTTGAATCCGGGAA--AGTCATAAATGCAACAGAACATATCGTTTGT 3583137 Query 6747 TGGGAGGGACAAGCAGGAGGTCTGGAAGGATTGCGACAAAAAGGATGGAGCGTTTTGAAC 6806 ||| |||| |||||||| || || || || |||| |||||||||||||||||| ||||| Sbjct 3583138 TGGAAGGGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAAC 3583197 Query 6807 CTACTAGTCATAAACAGAGAGTCTTCCATCCGAAATACTGTGGTAAAGGTTCTTGCCCAA 6866 || | ||| | | || | |||| ||||| | ||| ||| |||||| Sbjct 3583198 TACCTGGGCATCGAGCGTCAGGCCAAGATCCAGAATACCCATATCAAGTGTCTGGCCCAA 3583257 Query 6867 GGAGACAATCAGGTGATCTGCAC 6889 |||||||| ||| | || ||||| Sbjct 3583258 GGAGACAACCAGATAATATGCAC 3583280 >seq1107 Length=3620151 Score = 120 bits (132), Expect = 2e-23 Identities = 309/467 (66%), Gaps = 18/467 (4%) Strand=Plus/Minus Query 6342 GGAAGATTTTTCTCCCTAATGTCATGGCAGTTAAGGGAGTACTTCGTCATCACAGAGTAC 6401 || |||||||| || | ||| | ||| || | || |||| || || ||||||| | Sbjct 2215002 GGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGAGAGTTTTTTGTGGTCACAGAACAT 2214943 Query 6402 TTGATCAAAACACACTATGTCCCGTTGTTCAAGGGACTGACGATGGCAGATGACCTTACA 6461 ||||||||||| |||||||| || |||||| | || || || |||||||| |||| | Sbjct 2214942 TTGATCAAAACCCACTATGTTCCATTGTTCCACGGGCTCACCATGGCAGACGACCACAAT 2214883 Query 6462 TCCGTTGTGAAGAAGATGTTGGACAACA-CAAATGGACAAGGATTGGATGACTACTCCTC 6520 | || | |||||||| | | || | || ||| || ||| ||| | | Sbjct 2214882 ACAGTGATAGAGAAGATGCTCG-CAGCTTCAGATGCCCAGAACCCGGAAGAC--CCGAAC 2214826 Query 6521 TATCTGTATT--GCCAACCACATTGACTACGAAAAATGGAATAATCATCAGAGGAAAGAG 6578 | | ||| || || ||| |||| ||| ||| |||||||| || ||| | |||| Sbjct 2214825 CAAGTAAATTACGCGAATCACCTTGATTACTCAAAGTGGAATAACCACCAGCGAGGAGAG 2214766 Query 6579 TCTAATGGTCCAGTGTTTCGAGTAATGGGACAGTTTCTAGGGTATCCTAGACTGTTTGAA 6638 | || | || |||||| | || ||||| || || || ||| || | ||||| Sbjct 2214765 GCGAACGACCCGGTGTTTAGGGTCATGGGTCAATTCCTGGGGCTCCCGAACCTGTTCACT 2214706 Query 6639 AGGACACATGAGTTCTTTGAGTCCAGCCTCATCTACTACAATGGAAGACCAGACCTGATG 6698 |||| ||||||||||| || ||| |||| ||||| | | || ||||||| Sbjct 2214705 CGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTATTACAAAGACCGGCCGGACCTGA-- 2214648 Query 6699 GATGTGAGAGGGGATTC------ATTGATCAACACTACAGACAAATTAGTGTGTTGGGAG 6752 |||||| ||| || | ||||| | || || || | || || |||||| Sbjct 2214647 ----TGAGAGTGGAATCTGGAAAGGTCATCAATGCCACCGAAAACATCGTTTGCTGGGAG 2214592 Query 6753 GGACAAGCAGGAGGTCTGGAAGGATTGCGACAAAAAGGATGGAGCGT 6799 || ||||| || || |||||||| | ||||| || |||||||| || Sbjct 2214591 GGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGATGGAGTGT 2214545 >seq1774 Length=2904822 Score = 114 bits (126), Expect = 9e-22 Identities = 308/467 (66%), Gaps = 18/467 (4%) Strand=Plus/Minus Query 6342 GGAAGATTTTTCTCCCTAATGTCATGGCAGTTAAGGGAGTACTTCGTCATCACAGAGTAC 6401 || |||||||| || | ||| | ||| || | || |||| || || ||||||| | Sbjct 1686494 GGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGAGAGTTTTTTGTGGTCACAGAACAT 1686435 Query 6402 TTGATCAAAACACACTATGTCCCGTTGTTCAAGGGACTGACGATGGCAGATGACCTTACA 6461 ||||||||||| |||||||| || |||||| | || || || |||||||| |||| | Sbjct 1686434 TTGATCAAAACCCACTATGTTCCATTGTTCCACGGGCTCACCATGGCAGACGACCACAAT 1686375 Query 6462 TCCGTTGTGAAGAAGATGTTGGACAACA-CAAATGGACAAGGATTGGATGACTACTCCTC 6520 | || | |||||||| | | || | || ||| || ||| ||| | | Sbjct 1686374 ACAGTGATAGAGAAGATGCTCG-CAGCTTCAGATGCCCAGAACCCGGAAGAC--CCGAAC 1686318 Query 6521 TATCTGTATT--GCCAACCACATTGACTACGAAAAATGGAATAATCATCAGAGGAAAGAG 6578 | | ||| || || ||| | || ||| ||| |||||||| || ||| | |||| Sbjct 1686317 CAAGTAAATTACGCGAATCACCTGGATTACTCAAAGTGGAATAACCACCAGCGAGGAGAG 1686258 Query 6579 TCTAATGGTCCAGTGTTTCGAGTAATGGGACAGTTTCTAGGGTATCCTAGACTGTTTGAA 6638 | || | || |||||| | || ||||| || || || ||| || | ||||| Sbjct 1686257 GCGAACGACCCGGTGTTTAGGGTCATGGGTCAATTCCTGGGGCTCCCGAACCTGTTCACT 1686198 Query 6639 AGGACACATGAGTTCTTTGAGTCCAGCCTCATCTACTACAATGGAAGACCAGACCTGATG 6698 |||| ||||||||||| || ||| |||| ||||| | | || ||||||| Sbjct 1686197 CGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTATTACAAAGACCGGCCGGACCTGA-- 1686140 Query 6699 GATGTGAGAGGGGATTC------ATTGATCAACACTACAGACAAATTAGTGTGTTGGGAG 6752 |||||| ||| || | ||||| | || || || | || || |||||| Sbjct 1686139 ----TGAGAGTGGAATCTGGAAAGGTCATCAATGCCACCGAAAACATCGTTTGCTGGGAG 1686084 Query 6753 GGACAAGCAGGAGGTCTGGAAGGATTGCGACAAAAAGGATGGAGCGT 6799 || ||||| || || |||||||| | ||||| || |||||||| || Sbjct 1686083 GGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGATGGAGTGT 1686037 >seq1480 Length=8353993 Score = 78.8 bits (86), Expect = 7e-11 Identities = 109/151 (72%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 6742 TGTGTTGGGAGGGACAAGCAGGAGGTCTGGAAGGATTGCGACAAAAAGGATGGAGCGTTT 6801 |||||||| | ||||| || ||||| || ||||| ||| |||||||||| ||||| ||| Sbjct 8252733 TGTGTTGGAATGGACAGGCCGGAGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTC 8252674 Query 6802 TGAACCTACTAGTCATAAACAGAGAGTCTTCCATCCGAAATACTGTGGTAA--AGGTTCT 6859 | || || | || || | || ||||| ||| || || ||| ||| | ||| Sbjct 8252673 TCAATTTATTGGTAATCGAGAGGGAGTCACGCATTCGTAACACTAAGGTGCTCACGTTA- 8252615 Query 6860 TGCCCAAGGAGACAATCAGGTGATCTGCACT 6890 || || || ||||||||||| || |||||| Sbjct 8252614 -GCTCAGGGTGACAATCAGGTCATTTGCACT 8252585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35391030480400