Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025384.1 Length=11190 Score E Sequences producing significant alignments: (Bits) Value seq1594 161 7e-36 seq1774 147 2e-31 seq1107 141 7e-30 >seq1594 Length=5600000 Score = 161 bits (178), Expect = 7e-36 Identities = 585/902 (65%), Gaps = 14/902 (2%) Strand=Plus/Plus Query 6266 CTGGTTATTGCCTTGAGGGTGAAAGAGAGAGAGATTAAGGACATCGGACGCTTCTTCGCG 6325 || ||||| |||||||||| ||||| || || || ||||| || || | |||||||| Sbjct 3582688 CTAGTTATCGCCTTGAGGGCTAAAGAAAGGGAAATCAAGGAGATGGGCAGATTCTTCGCA 3582747 Query 6326 CTCATGAGTTGGATGGTGCGGGAGTACTTTGTTATCACAGAATATCTCATCAAAGAGTTC 6385 | ||| ||| | ||||||| ||| ||| |||| || | || ||||| | Sbjct 3582748 ATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCACCTAATCAAGACCCAC 3582807 Query 6386 TACCTCCCCCTCTTCTCCGGACTCACCATGGCGGATGACTTCAACACAGTCACCGACAAA 6445 || | ||| | || || || |||||||| || ||| ||||| || | ||| || Sbjct 3582808 TATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAACACCGTGATCGAGAAG 3582867 Query 6446 ATGCTGAAGTGCAGC-GACGGACAAGGGACAAATGACTACAAAACTGTGACCATTGCCAA 6504 ||| | | ||| | || | |||| || | || ||| || | | ||| || Sbjct 3582868 ATGTT-AGCTGCCTCCGATGCACAAAATCCAGAGGATCCCAACCAGGTCAACTATGCTAA 3582926 Query 6505 CCACCTGGACTACACTAAATGGAACAACCACCAGCGGGCAGAAGCAAACAATCCGGTATT 6564 |||||| |||||| | |||||||||||||| || || | |||||| || | || || || Sbjct 3582927 CCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGTGTT 3582986 Query 6565 CAAAGTGATGGGGCAATTCCTGGGGTACCCCAATCTATTCACCAGGTCCCACGAGATCTT 6624 ||| |||||||| ||||| |||| ||| ||| | || || | | |||||| |||| Sbjct 3582987 CAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGAGTTCTT 3583046 Query 6625 CCAGAAGTCACTGATCTATTACAAGGACAGGCCGGACCTGATGCAGGTGGTCGAGGGGCG 6684 | |||||| |||||||| ||||| || || || ||||| ||| ||| | ||| Sbjct 3583047 TCGGAAGTCCCTGATCTACTACAAAGATAGACCAGACCTCATGAGGGTTGAATCCGGGAA 3583106 Query 6685 TGTGGTGAA--CAAGGAGGGCTCCTTCGTCTGCTGGAATGGTCAGGACGGGGGACTGGAG 6742 || | || ||| || | |||| || ||||| || || | || || || ||| Sbjct 3583107 AGTCATAAATGCAA-CAGAAC-ATATCGTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAG 3583164 Query 6743 GGCTTGCGGCAGAAGGGCTGGACAATCATGAACTACCTAGCGATAGATCATTTCGGGC-- 6800 ||| |||| || || || |||| | |||||||||| | || || | || ||| Sbjct 3583165 GGCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTGGGCATCGAGC--GTCAGGCCA 3583222 Query 6801 GGATTCGAAATACGGAACTC-TCCGTCTTGGCACAGGGGGACAATCAAGTGCTCTGCACC 6859 ||| | ||||| | || ||| |||| || || ||||| || | | |||||| Sbjct 3583223 AGATCCAGAATACCCATATCAAGTGTC-TGGCCCAAGGAGACAACCAGATAATATGCACC 3583281 Query 6860 CAGTACAAGATACGCGAGAGCAGGACTGACGCGGAAGAAGAC-GCCAATATTGCGGACGC 6918 |||||| | || ||||| | | || || ||| | | | || ||||| Sbjct 3583282 TTCTACAAGGTGCGATCAAGCAGATCACCTGAGG-AGCTGACATCGCACTTAGCTGACGC 3583340 Query 6919 ATTCCTGAACAACCAGATCATTTTCGACGCGGTTCAGGCTGGAACTGCCAAGCTCGGGTT 6978 | |||||| | || || | || | ||| || | | |||||||| || Sbjct 3583341 CAAACGCAACAACGACATTATCATGGAGTCAATTCGTATCGGCGCAGGGAAGCTCGGCTT 3583400 Query 6979 GATCGTCAACGCTGAGGAGACCCTGCAGTCGGCGTCCCTGCTCCTCTACGGCAAGGTCAT 7038 | | | || | || || || || ||||| | || || || | ||||| |||||||| Sbjct 3583401 GGTGATTAATGAGGACGAAACGCTCCAGTCATCTTCTATGATCGTGTACGGAAAGGTCAT 3583460 Query 7039 CATGTATCGAGGAGTGTTCAAGGGTCTGGACGAGAAGCGTCTCGGGAGAATCCTTTGCAC 7098 ||| || | ||| || ||| || |||||| ||||| || | | |||||||| Sbjct 3583461 CATCTACCACGGACTGATCATTCCGCTTATCGAGAAACGTCTGGGACGCTTACTTTGCAC 3583520 Query 7099 CACGAACGACCAGTTACCTAATCTTGGATCGATCGCGGCCACAGTTGTAACCAACGTCCT 7158 || |||| |||| | || | | | || || ||| |||| || || |||||| | || Sbjct 3583521 AACAAACGGCCAGCTGCCGACTATCGGCTCTATCTGCTCCACTGTGGTTACCAACCTTCT 3583580 Query 7159 GA 7160 || Sbjct 3583581 GA 3583582 >seq1774 Length=2904822 Score = 147 bits (162), Expect = 2e-31 Identities = 342/506 (68%), Gaps = 20/506 (4%) Strand=Plus/Minus Query 6294 GAGAGATTAAGGACATCGGACGCTTCTTCGCGCTCATGAGTTGGATGGTGCGGGAGTACT 6353 ||||||| ||||| || || | || || || | ||| ||| | | | |||| | Sbjct 1686511 GAGAGATCAAGGAGATGGGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGAGAGTTTT 1686452 Query 6354 TTGTTATCACAGAATATCTCATCAAAGAGTTCTACCTCCCCCTCTTCTCCGGACTCACCA 6413 |||| |||||||| || | |||||| ||| | || | ||| ||| ||||||| Sbjct 1686451 TTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCACGGGCTCACCA 1686392 Query 6414 TGGCGGATGACTTCAACACAGTCACCGACAAAATGCT-GAAG-TGCAGCGACGGACAA-- 6469 |||| || ||| ||| ||||| | || || ||||| | || | ||| | | || Sbjct 1686391 TGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCGCAGCTTCAGATGCCCAGAACC 1686332 Query 6470 -GGGACAAATGACTACAAAACTGTGACCATT--GCCAACCACCTGGACTACACTAAATGG 6526 || | | || || || || | ||| || || |||||||| ||| | || ||| Sbjct 1686331 CGGAAGACCCGA--ACCAA---GTAA--ATTACGCGAATCACCTGGATTACTCAAAGTGG 1686279 Query 6527 AACAACCACCAGCGGGCAGAAGCAAACAATCCGGTATTCAAAGTGATGGGGCAATTCCTG 6586 || ||||||||||| | ||| || ||| | ||||| || | || ||||| ||||||||| Sbjct 1686278 AATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTCAATTCCTG 1686219 Query 6587 GGGTACCCCAATCTATTCACCAGGTCCCACGAGATCTTCCAGAAGTCACTGATCTATTAC 6646 ||| ||| || || ||||| || |||| ||| ||||| |||| || || |||||||| Sbjct 1686218 GGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTATTAC 1686159 Query 6647 AAGGACAGGCCGGACCTGATGCAGGTGGTCGAGGGGCGTGTGGTGAACAAGG---AGGGC 6703 || ||| |||||||||||||| || || || | ||| | ||| | | Sbjct 1686158 AAAGACCGGCCGGACCTGATG-AG--AGTGGAATCTGGAAAGGTCATCAATGCCACCGAA 1686102 Query 6704 TCCTTCGTCTGCTGGAATGGTCAGGACGGGGGACTGGAGGGCTTGCGGCAGAAGGGCTGG 6763 | |||| |||||| | || || | ||| |||||||| || | || |||||||| ||| Sbjct 1686101 AACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGATGG 1686042 Query 6764 ACAATCATGAACTACCTAGCGATAGA 6789 | | | |||||||| | ||| || Sbjct 1686041 AGTGTGGTCAACTACCTTGGGATCGA 1686016 >seq1107 Length=3620151 Score = 141 bits (156), Expect = 7e-30 Identities = 341/506 (67%), Gaps = 20/506 (4%) Strand=Plus/Minus Query 6294 GAGAGATTAAGGACATCGGACGCTTCTTCGCGCTCATGAGTTGGATGGTGCGGGAGTACT 6353 ||||||| ||||| || || | || || || | ||| ||| | | | |||| | Sbjct 2215019 GAGAGATCAAGGAGATGGGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGAGAGTTTT 2214960 Query 6354 TTGTTATCACAGAATATCTCATCAAAGAGTTCTACCTCCCCCTCTTCTCCGGACTCACCA 6413 |||| |||||||| || | |||||| ||| | || | ||| ||| ||||||| Sbjct 2214959 TTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCACGGGCTCACCA 2214900 Query 6414 TGGCGGATGACTTCAACACAGTCACCGACAAAATGCT-GAAG-TGCAGCGACGGACAA-- 6469 |||| || ||| ||| ||||| | || || ||||| | || | ||| | | || Sbjct 2214899 TGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCGCAGCTTCAGATGCCCAGAACC 2214840 Query 6470 -GGGACAAATGACTACAAAACTGTGACCATT--GCCAACCACCTGGACTACACTAAATGG 6526 || | | || || || || | ||| || || ||||| || ||| | || ||| Sbjct 2214839 CGGAAGACCCGA--ACCAA---GTAA--ATTACGCGAATCACCTTGATTACTCAAAGTGG 2214787 Query 6527 AACAACCACCAGCGGGCAGAAGCAAACAATCCGGTATTCAAAGTGATGGGGCAATTCCTG 6586 || ||||||||||| | ||| || ||| | ||||| || | || ||||| ||||||||| Sbjct 2214786 AATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTCAATTCCTG 2214727 Query 6587 GGGTACCCCAATCTATTCACCAGGTCCCACGAGATCTTCCAGAAGTCACTGATCTATTAC 6646 ||| ||| || || ||||| || |||| ||| ||||| |||| || || |||||||| Sbjct 2214726 GGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTATTAC 2214667 Query 6647 AAGGACAGGCCGGACCTGATGCAGGTGGTCGAGGGGCGTGTGGTGAACAAGG---AGGGC 6703 || ||| |||||||||||||| || || || | ||| | ||| | | Sbjct 2214666 AAAGACCGGCCGGACCTGATG-AG--AGTGGAATCTGGAAAGGTCATCAATGCCACCGAA 2214610 Query 6704 TCCTTCGTCTGCTGGAATGGTCAGGACGGGGGACTGGAGGGCTTGCGGCAGAAGGGCTGG 6763 | |||| |||||| | || || | ||| |||||||| || | || |||||||| ||| Sbjct 2214609 AACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGATGG 2214550 Query 6764 ACAATCATGAACTACCTAGCGATAGA 6789 | | | |||||||| | ||| || Sbjct 2214549 AGTGTGGTCAACTACCTTGGGATCGA 2214524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35691822240360