Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025394.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq1480 109 4e-20 seq1594 93.3 3e-15 >seq1480 Length=8353993 Score = 109 bits (120), Expect = 4e-20 Identities = 254/380 (67%), Gaps = 11/380 (3%) Strand=Plus/Minus Query 6492 GCTAATCACATTGATTATGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCT 6551 ||||||||||| |||||||| ||||||||||| ||| |||| |||| | | | || Sbjct 8252947 GCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTCCCCC 8252888 Query 6552 GTTTTCCGTGTCATGGGTCAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAA 6611 |||||| || || || || || || ||| | ||||| || | || | || |||||| Sbjct 8252887 GTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCATGAA 8252828 Query 6612 TTCTTTGAAAAAAGTCTGATATATTACAATGGGAGACCAGATTTGATGAAAGTGCAAGGA 6671 |||||||||||| | |||||||| | | |||||| | || || || ||| Sbjct 8252827 TTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGGTCGAAG-- 8252770 Query 6672 AATTCATTAGTC---AAT----AACAGCAATCAGCGGGTATGTTGGAACGGACAGGCAGG 6724 || | ||| ||| | | | || | | | |||||||| |||||||| || Sbjct 8252769 -ATGGGGTGGTCGCGAATGTGGACCCGGAA-AGGATGATGTGTTGGAATGGACAGGCCGG 8252712 Query 6725 AGGTTTGGAGGGCTTGAGGCAAAAGGGATGGAGTATTTTGAACCTATTGGTTATCCAGCG 6784 ||| | || || ||||| ||||| || |||||| || | || ||||||| ||| || | Sbjct 8252711 AGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAATCGAGAG 8252652 Query 6785 AGAATCCAAGATCAGAAATACCGCAGTGAAGGTGTTGGCACAGGGTGATAATCAAGTAAT 6844 || || || | || || ||| ||| || |||||||| ||||| || || Sbjct 8252651 GGAGTCACGCATTCGTAACACTAAGGTGCTCACGTTAGCTCAGGGTGACAATCAGGTCAT 8252592 Query 6845 CTGTACTCAATACAAGACAA 6864 || ||| || |||||| Sbjct 8252591 TTGCACTGTGTATCAGACAA 8252572 >seq1594 Length=5600000 Score = 93.3 bits (102), Expect = 3e-15 Identities = 244/365 (67%), Gaps = 12/365 (3%) Strand=Plus/Plus Query 6492 GCTAATCACATTGATTATGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCT 6551 ||||| ||| | || || ||||||||||| ||||| || ||| | |||| ||| Sbjct 3582922 GCTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCT 3582981 Query 6552 GTTTTCCGTGTCATGGGTCAGTTCTTGGGATTTCCTAACCTTATAT-CCAGGACTCATGA 6610 || ||| || ||||| || || ||||| | ||| || || | | | | ||||| || Sbjct 3582982 GTGTTCAAGGTGATGGGCCAATTTTTGGG-TCTCCCAAATTTGTTTACTCGAACTCACGA 3583040 Query 6611 ATTCTTTGAAAAAAGTCTGATATATTACAATGGGAGACCAGATTTGATGAAAGTGCAA-- 6668 |||||| || ||||| || ||||| | |||||||| | |||| || || Sbjct 3583041 GTTCTTTCGGAAGTCCCTGATCTACTACAAAGATAGACCAGACCTCATGAGGGTTGAATC 3583100 Query 6669 --GGAAATTCATTAGTCAATAACAGCAATCAGCGGGTATGTTGGAACGGACAGGCAGGAG 6726 ||||| |||| | | ||||| | || || |||||||| || || ||||| | Sbjct 3583101 CGGGAAAGTCATAAAT--GCAACAG--AACATATCGTTTGTTGGAAGGGCCAAGCAGGCG 3583156 Query 6727 GTTTGGAGGGCTTGAGGCAAAAGGGATGGAGTATTTTGAACCTATTGGTTATCCAGCGAG 6786 | | |||||| || | ||||| |||||||| || ||||| ||| ||| |||| Sbjct 3583157 GGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTGGGCATCGAGCGTC 3583216 Query 6787 AATCCAAGATCAGAAATACCGCAGTGAAGGTGT-TGGCACAGGGTGATAATCAAGTAATC 6845 | |||||||| |||||| || | |||| |||| || || || || || |||| Sbjct 3583217 AGGCCAAGATCCAGAATACC-CATATCAAGTGTCTGGCCCAAGGAGACAACCAGATAATA 3583275 Query 6846 TGTAC 6850 || || Sbjct 3583276 TGCAC 3583280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35413429866780