Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_026620.1 Length=10125 Score E Sequences producing significant alignments: (Bits) Value seq570 89.7 3e-14 >seq570 Length=1853759 Score = 89.7 bits (98), Expect = 3e-14 Identities = 180/264 (68%), Gaps = 5/264 (2%) Strand=Plus/Plus Query 8796 CATGGG-AAAAAGAGAGAAAAAACCTGGTGAGTATGGTGTGGCTAAAGGGAGTCGCACCA 8854 |||||| |||||| | |||||||| || | ||| | ||||| ||| || || | Sbjct 257989 CATGGGCAAAAAGGAAAAAAAAACCGGGGGTTGCTGGAGAAGCTAAGGGGTCGCGTACGA 258048 Query 8855 TTTGGTACATGTGGTTAGGCAGCAGATTCCTTGAGTTTGAAGCGTTTGGGTTTTTAAATG 8914 |||||||||||||| ||||| |||| ||||| || |||||||| |||| || | || | Sbjct 258049 TTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCTTCCTCAACG 258108 Query 8915 AGGAACATTGGGCT--TCTCGAAAACTTAGTGGAGGAGGAGTTGAAGGAGTGCCACTAGC 8972 || || |||| | || ||| ||||| | |||||||| | ||||| | Sbjct 258109 CTGACCACTGGGTTAGTCGCGAGAACTTCCCG--GGAGGAGTAGGGGGAGTTGGGGTCAA 258166 Query 8973 GTACCTTGGTTACTTGCTGTCAGAAATGGCCGACAAGCCAGGTGTGTTGTACGCGGATGA 9032 ||| |||| | | || ||| || || | | | | | || | ||| ||||| Sbjct 258167 CTACTTTGGGAATTATTTGAAAGACATCGCAAAAAGGGGAAAATTTTTATTCGCCGATGA 258226 Query 9033 CACTGCTGGATGGGACACTCGGAT 9056 || |||||||||||||||||| || Sbjct 258227 CATTGCTGGATGGGACACTCGTAT 258250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32283915598260