Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_027817.1 Length=10893 Score E Sequences producing significant alignments: (Bits) Value seq570 176 3e-40 seq296 136 3e-28 seq65 134 1e-27 >seq570 Length=1853759 Score = 176 bits (194), Expect = 3e-40 Identities = 477/715 (67%), Gaps = 15/715 (2%) Strand=Plus/Plus Query 8918 AACACCATGGGCAAGAAGGAGAAGAAA-CCTTCAGCCATGGGCGTGGCCAAGGGCTCTCG 8976 || ||||||||||| ||||| || ||| || | || | || ||||| || || Sbjct 257984 AATACCATGGGCAAAAAGGAAAAAAAAACCGGGGGTTGCTGGAGAAGCTAAGGGGTCGCG 258043 Query 8977 AACCATTTGGTACATGTGGTTAGGTTCACGGTTTTTGGAGTACGAAGCCCTTGGCTTCTT 9036 || ||||||||||||||| |||| | |||| | || | ||||| ||||||||| | Sbjct 258044 TACGATTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCTTCCT 258103 Query 9037 AAATGAAGATCATTGGGT--GTCACGAGACAACTTGGCATGTGGTGTTGGTGGAGTGGGA 9094 || | || || ||||| ||| |||| ||||| | | || || || ||||| || Sbjct 258104 CAACGCTGACCACTGGGTTAGTCGCGAG--AACTTCCCGGGAGGAGTAGGGGGAGTTGGG 258161 Query 9095 GTGAATTACTTCGGCTACTACCTACAAGAAATTGCACGGAAAGGGAAGTTTTTTA-TCGC 9153 || || ||||| || | || | |||| || ||| || ||||| |||||| |||| Sbjct 258162 GTCAACTACTTTGGGAATTATTTGAAAGACATCGCA-AAAAGGGGAAAATTTTTATTCGC 258220 Query 9154 CGATGACATAGCGGGATGGGACACGCGGATCA-ATGAGAGTGACTTGGCCGATGAGGAAT 9212 ||||||||| || ||||||||||| || || | | || || ||| || || ||| Sbjct 258221 CGATGACATTGCTGGATGGGACACTCGTATTAGCTCTGA-AGATCTGGAGGACGAAGAAA 258279 Query 9213 TTCTCATCATGTCCCTCATTTGTGACCCATACCATCGATCACTTGCAAAAGCCGTGTTTC 9272 ||| | | | | | ||| || | ||| || |||| | ||| | Sbjct 258280 CTCTTCTAACGGAGTTGGCTATTGATCCTTTCCACCGTGCACTAATATCCGCCACCATGA 258339 Query 9273 GGTTTGCCTACCAGAACATTGTGGCCTTGTTTCCGCGAAATCATCCTGGGTTTGGAAGTG 9332 | | || ||||||||||| || | | |||| || |||| ||| || | ||| |||| Sbjct 258340 GACTCGCTTACCAGAACATCGTTGTCATGTTCCCACGAACCCATTCTAAATATGGCAGTG 258399 Query 9333 GAACGGTGATGGATGTCGTGGCCAGAACTGACCAACGAGGTTCAGGACAGGTCGTGACTT 9392 |||| ||||||||||| || | ||||| |||||||| || || || || |||||||| | Sbjct 258400 GAACTGTGATGGATGTTGTTGGCAGAAGGGACCAACGCGGATCGGGCCAAGTCGTGACAT 258459 Query 9393 ACGCTCTAAACACGATAACGAACGCCAAGATTCAATTAGGCAGAATGCTGGAAGCCGAAG 9452 |||| |||||||| ||||| || | ||| | || | | | | ||| |||| || | Sbjct 258460 ACGCCCTAAACACCATAACCAATGGAAAGGTCCAGGTTGCCCGTATGTTGGAGAGTGACG 258519 Query 9453 GATTACTAGACG-CTCATGAACATGTAATCAAAAAATGGTTAAACGACAATGGTGAAGAG 9511 | || | ||| |||| | ||| || || |||||| | || || || |||| Sbjct 258520 GTTTGTTGCACGCCTCA-CCCCTTGTGATTAATAAATGGCTGGCTGATAA-CATGGAGAG 258577 Query 9512 GCTCTCTCCGGG--ATGGTGGTGGCCGGGGATGATGTTGTAGTTGCGACCAACAACGGAA 9569 | |||| | | |||| | || |||||||| || || || | || |||||| | | Sbjct 258578 AAT-TCTCGGAGATATGGGTATCGCTGGGGATGACGTCGTTGTGTCCACTAACAACCGCA 258636 Query 9570 ATTTTTCAAGGTCCTTACGATACCTCCATTTGAACGGGAAAATTCGTAAAGACAT 9624 ||||| | |||||| ||||| | |||| || |||| || ||| |||| Sbjct 258637 ATTTTGCTTTCTCCTTAGAGTACCTTGAGTTGACGGGTAAAACACGGAAAAACAT 258691 Score = 134 bits (148), Expect = 1e-27 Identities = 185/259 (71%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 9747 ATGAAATCATTGGACGAGGCAGGATTCAAAAAGGAGGGTTGGTGACCCTTGCCGAAAGTG 9806 ||||||| || || | ||||| | || |||||||| | |||| | | || || || | Sbjct 12500 ATGAAATAATCGGCAGGAGCAGGCTCCAGAAAGGAGGTCTCGTGAGCTTAGCTGAGAGCG 12441 Query 9807 CCTGCCTAGCGAAGGCTTATGGGCAAATGTGGGCTTTGTATTTCTTTCACCGAAGAGATC 9866 |||| | || ||||| || | ||||||||||| | |||||||||||||| | |||| Sbjct 12440 CCTGTATGGCCAAGGCCTACGCACAAATGTGGGCCCTATATTTCTTTCACCGTCGGGATC 12381 Query 9867 TGCGGATGGCTTTTCTAGCCATAACTTCGAGTGTTCCAATAGACTGGTTCCCAGAGGGCC 9926 | || ||| || || ||||| ||| |||| || ||||| || | ||| | Sbjct 12380 AGAGGTTGGGGTTCTGTGCTATAACGTCGGCGATTCCCTCTGATTGGTTTCCTGTGGGGC 12321 Query 9927 GGACCTCGTGGTCGATTCACCAAAATAAAGAGTGGATGACCACTGAGGACATGTTGCGGG 9986 | || || ||||| || ||||| ||| | ||||||||||||||||| || ||| | || | Sbjct 12320 GAACATCTTGGTCCATCCACCAGAATCATGAGTGGATGACCACTGATGATATGCTACGAG 12261 Query 9987 TCTGGAATACAGTGTGGAT 10005 | |||||| || ||||| Sbjct 12260 TGTGGAATGACGTTTGGAT 12242 >seq296 Length=5246318 Score = 136 bits (150), Expect = 3e-28 Identities = 266/388 (69%), Gaps = 10/388 (3%) Strand=Plus/Plus Query 2756 TGTGGAAAAGCGATTGGATTCCAGTATGATTTTGTTGGATACCGTCGGACCATGTATGGA 2815 ||||| || ||||| ||| || | | |||||||||| || || | ||||||| Sbjct 814992 TGTGGCAAGGCGATATCATTTCAATTCAAATTTGTTGGATTTCGGCGTGGCCTGTATGGG 815051 Query 2816 TCTAATGTCCAGTTAAAAATATCAAAGAAGGTTTCGATTGAATGTCCCACATACTTGGCA 2875 || ||||| ||| | | | || || | || ||| | | || || || ||| |||| Sbjct 815052 TCAAATGTGCAGGTTGCAGTTTCGAAACAAGTATCGCATCATTGCCCTACGTACCTGGCT 815111 Query 2876 GGAGTCGCCGTGAAAAATGATAGAACGGTTTTCACTGATGGAATGTTCTGGATGTCATCG 2935 || || ||||| || || ||| | || | | ||||||||||||||||||||| | Sbjct 815112 GGGGTTGCCGTCAAGAACGATCGCACCATCATAACTGATGGAATGTTCTGGATGGAAAGT 815171 Query 2936 AAACGTGAGAATGGAACATACGCGATCACTGAGTTAGAGATGGAGCAGTCTCACAAGTGC 2995 || || ||||| || | ||| || | | || ||| |||||||||| |||| Sbjct 815172 GAAATTGTCAATGGGACCCAACGGATTGTTGTGCTTGAAATGCTGCAGTCTCACCGGTGC 815231 Query 2996 ATCTGGCCAGACCAA--TACACTCCTGACGCCACTT---TGACGCCACGTGACAATGAAA 3050 | ||||| | ||| |||||||| ||||| ||| ||| ||||| ||| | | Sbjct 815232 CTGTGGCC--ATCAACGTACACTCCCGACGC--CTTGCCTGATCCCACG-GACCTCAACA 815286 Query 3051 TGTTTGTTCCGCCTGAGTGGGGAGGGCCAATGTCGAAAGCCAACCACATTCCTGGTTACA 3110 | || | || || | ||||||||||| || || || ||||| ||||| || || |||| Sbjct 815287 TTTTCATCCCCCCCGTCTGGGGAGGGCCCATCTCAAAGGCCAATCACATCCCAGGCTACA 815346 Query 3111 AAATGCAGACTGGATTTCCATGGAACAA 3138 | |||||||| | || ||||||||||| Sbjct 815347 AGATGCAGACGGACTTCCCATGGAACAA 815374 Score = 131 bits (144), Expect = 1e-26 Identities = 680/1070 (64%), Gaps = 54/1070 (5%) Strand=Plus/Plus Query 8419 GGAACATGCGGACACGTGGTTCGTTGACAACAACCATCCATACCAATCATTTCGGTATGT 8478 |||| || || || |||||| ||| | | ||||| ||| || || | ||| | Sbjct 840123 GGAAAATCAGGCAACTTGGTTCACCGACCCCGATCATCCCTACAAAAGCTTCTGCTATTT 840182 Query 8479 GGGATCGTACGTCACAGATGATGTGACACCAGGAGGTCAGACTGTCAACCCATTAATGAG 8538 || || | || || |||||||| | | ||||| ||| |||| ||||| | | || Sbjct 840183 CGGGTCTTTTGTGACTGATGATGTTAAAGTTGGAGGACAGGCTGTTAACCCGCTGGTTAG 840242 Query 8539 AAAAATGATGTGGCCGTGGGAGACTGTTGGAGGAGTTGTAAATTTCATGATGACGGACGT 8598 || ||||||||||||||||||| || | ||||| | ||| | ||||| ||||| Sbjct 840243 GAAGCTGATGTGGCCGTGGGAGACGGTCACTAGCGTTGTCAGCTTCTTAATGACTGACGT 840302 Query 8599 GTCCACATATGCCCAACAGAAGGTGTTGCGAGAGAAGGTCGACACACT--ATCCCCTGAA 8656 ||||| ||| |||| |||||||| |||| |||||||| ||||| | ||||| Sbjct 840303 CTCCACCTATTCCCAGCAGAAGGTTCTGCGGGAGAAGGTTGACACCGTTATTCCCCCCCC 840362 Query 8657 CCTCCAAACGAC--ATTCAAAGGGTTAACAGATGGATCAC-CGAGTTCTTGTGTGCTTCA 8713 || || | || |||| |||||||| | || || || |||| | || Sbjct 840363 CCCCCCCGCCACAAATTCGTTTGGTTAACAAAGCCATAACGCGCCACTTTGTTCGGATC- 840421 Query 8714 TTCATGCGTCGAGGGTTGAAACCTAGAATCCTGACCATGGAGCAAT--ATATCAA--CAA 8769 |||| | | ||| | ||| |||| | |||| ||| || ||| | Sbjct 840422 TTCAAAGAGAAAAACCTCCGACCCCGGATCATGACGAAGGAGGAATTCATTGCAAACGTA 840481 Query 8770 CGTAAAGAGCTCAGCTGCCATTGGATCGTGGAGCAGTGATGTCCCGTGGAGCAGTGTCCG 8829 ||||| || || ||||| ||||| |||||| | ||| |||| ||||| ||| | Sbjct 840482 CGTAATGA----TGCCGCCATAGGATCATGGAGCCGCGATATCCCCTGGAGAGATGTGC- 840536 Query 8830 AGAAGCTTTAGCTGATAAAAGATTCCACC--AAATGGTCGAGGAGGAAAGGAAACTCCAC 8887 || || | | || | | | ||| | ||| | || || || ||| || Sbjct 840537 AGGAGGT---GGTGCAAGACCAGTCCTTCTGGAATCTTGTTGGCCGAGAGCGTGCTCTAC 840593 Query 8888 -TTAGC-AGGAGACTGCCGCATGTGCGTGTACAACACCATGGGCAAGAAGGAGAAGAAAC 8945 | || ||| | ||| ||||| | || || || ||||| || || || ||||| | Sbjct 840594 ATCTGCAAGGGAAATGCAATATGTGTCTCTATAATACTATGGGGAAAAAAGAAAAGAAGC 840653 Query 8946 CTTCAGCCATGGGCGTGGCCAAGGGCTCTCGAACCATTTGGTACATGTGGTTAGGTTCAC 9005 | || || | ||| ||||| ||||| || || ||||| |||||| | || Sbjct 840654 CCGGAGTTGCTGGTGAGGCAAAGGGATCTCGGACTATCTGGTATATGTGGCTCGGGAGCA 840713 Query 9006 GGTTTTTGGAGTACGAAGCCCTTGGCTTCTTAAATGAAGATCATTGGGTGTCACGAGACA 9065 | || |||||||||||||| || | ||| | || | ||| || ||||| || || | Sbjct 840714 GATTCTTGGAGTACGAAGCGCTGGCGTTCCTGAACGCAGACCACTGGGTCAGCCGTGAGA 840773 Query 9066 ACTTGGCATGTGGTGTTGGTGGAGTGGGAGTGAATTACTTCGGCTACTACCTACAAGAAA 9125 | || | | || ||||| || || || || || || || ||| | || || | || | Sbjct 840774 ATTTCCCCGGAGGAGTTGGCGGTGTTGGCGTCAACTATTTTGGCAATTATCTCAAGGAGA 840833 Query 9126 TTGCACGGAAAGGGAAGTTTTTTATCGCCGATGACATAGCGGGATGGGACAC---GCGGA 9182 || | | ||||| |||| | | || |||||||| || || |||||||| | || Sbjct 840834 TTTCCTGCAAAGGAAAGTACCTCTTTGCGGATGACATTGCTGGTTGGGACACCAAGGTGA 840893 Query 9183 TCAATGAGAGTGACTTGGCCGATGAGGAATTTCTCATCATGTCCCTCATTTGTGACCCAT 9242 | |||| || | | || |||||| |||| ||| || | |||| Sbjct 840894 GCTCTGAG---GATCTTGAAGACGAGGAAACTCTCCTCA-------CAGAGCTCACCC-- 840941 Query 9243 ACCATCGATCACTTGCA-AAAGCCGTG-TTTCG-----------GTTTGCCTACCAGAAC 9289 ||| || ||| || || ||| || | ||| | | || |||||||| Sbjct 840942 -CCA---GTCCCTTTCATAAGGCCCTGATATCGGCAACCATGAAGCTAGCGTACCAGAAT 840997 Query 9290 ATTGTGGCCTTGTTTCCGCGAAATCATCCTGGGTTTGGAAGTGGAACGGTGATGGATGTC 9349 |||| || ||||||| |||| ||| | ||| || ||||| || |||||||| Sbjct 840998 GTTGTCGCTATGTTTCCTCGAACCCATGTCAAATATGGTAGCGGAACCGTAATGGATGTT 841057 Query 9350 GTGGCCAGAACTGACCAACGAGGTTCAGGACAGGTCGTGACTTACGCTCTAAACACGATA 9409 || | || || || || |||||||||| ||||| || || ||||| || ||||| ||| Sbjct 841058 GTTGGAAGGACCGATCAGAGAGGTTCAGGCCAGGTTGTCACGTACGCCCTGAACACAATA 841117 Query 9410 ACGAACGCCAAGATTCAATTAGGCAGAATGCTGGAAGCCGAAGGATTACT 9459 || |||| || | ||| ||| | | ||| ||| |||||||| || Sbjct 841118 ACCAACGGAAAAGTCCAAATAGCTCGGACGCTAGAAAGTGAAGGATTGCT 841167 >seq65 Length=4361017 Score = 134 bits (148), Expect = 1e-27 Identities = 185/259 (71%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 9747 ATGAAATCATTGGACGAGGCAGGATTCAAAAAGGAGGGTTGGTGACCCTTGCCGAAAGTG 9806 ||||||| || || | ||||| | || ||| |||| | |||| | | || || || | Sbjct 2220067 ATGAAATAATCGGCAGGAGCAGGCTCCAGAAAAGAGGTCTCGTGAGCTTAGCTGAGAGCG 2220008 Query 9807 CCTGCCTAGCGAAGGCTTATGGGCAAATGTGGGCTTTGTATTTCTTTCACCGAAGAGATC 9866 ||||| | || ||||| || | ||||||||||| | |||||||||||||| | |||| Sbjct 2220007 CCTGCATGGCCAAGGCCTACGCACAAATGTGGGCCCTATATTTCTTTCACCGTCGGGATC 2219948 Query 9867 TGCGGATGGCTTTTCTAGCCATAACTTCGAGTGTTCCAATAGACTGGTTCCCAGAGGGCC 9926 | || ||| || || ||||| ||| |||| || ||||| || | ||| | Sbjct 2219947 AGAGGTTGGGGTTCTGTGCTATAACGTCGGCGATTCCCTCTGATTGGTTTCCTGTGGGGC 2219888 Query 9927 GGACCTCGTGGTCGATTCACCAAAATAAAGAGTGGATGACCACTGAGGACATGTTGCGGG 9986 | || || ||||| || ||||| ||| | ||||||||||||||||| || ||| | || | Sbjct 2219887 GAACATCTTGGTCCATCCACCAGAATCATGAGTGGATGACCACTGATGATATGCTACGAG 2219828 Query 9987 TCTGGAATACAGTGTGGAT 10005 | |||||| || ||||| Sbjct 2219827 TGTGGAATGACGTTTGGAT 2219809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34741448275380