Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_028236.1 Length=11072 Score E Sequences producing significant alignments: (Bits) Value seq1480 87.8 1e-13 >seq1480 Length=8353993 Score = 87.8 bits (96), Expect = 1e-13 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 6216 ATGATCTGATCATCGGATTAAAGGGTAAGGAGAGAGAAGTCAAAGTAAAAGGAAGATTCT 6275 ||||||| || |||||| | |||| ||| ||| | ||| | ||| ||||||||||||| Sbjct 8254044 ATGATCTCATTATCGGACTGAAGGCTAAAGAGCGGGAAATTAAATGGAAAGGAAGATTCT 8253985 Query 6276 TTTCCCTGATGTCTTGGAAGCTGAGAGAGTATTTCGTGGTGACGGAGTACTTGATAAAGG 6335 || | || ||| ||| | | || ||||| ||||| | | |||||||| |||||| Sbjct 8253984 TTGCTCTCATGAGCTGGTCGTTAAGGGAGTACTTCGTATTCTCAGAGTACTTAATAAAGA 8253925 Query 6336 AGCATTACGTTCCTTTATTTAATGGGCTGACAATGGCTGATGA 6378 | | |||||||||| || || || || ||||| || || Sbjct 8253924 AAAAAATAATTCCTTTATTCAAAGGTCTTACCATGGCAGACGA 8253882 Score = 86.0 bits (94), Expect = 4e-13 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 6451 TATTGCAAATCATATAGATTATGAGAAGTGGAACAATCACCAAAGAAAGGATGCCACTGG 6510 ||| || ||||| || |||||||| || |||||||| ||||||| || |||||| Sbjct 8252951 TATCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTC 8252892 Query 6511 TCCAGTTTTCAAAGTCATGGGTCAGTTTTTGGGGTATCCCAATTTAATATACCGGACACA 6570 || ||||||| ||| || || || ||||| || || ||| || | ||| || || Sbjct 8252891 CCCCGTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCA 8252832 Query 6571 TGAATTCTTTGAAAA 6585 ||||||||||||||| Sbjct 8252831 TGAATTCTTTGAAAA 8252817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35314232584240