Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_028241.1 Length=14478 Score E Sequences producing significant alignments: (Bits) Value seq1774 104 2e-18 seq1107 104 2e-18 >seq1774 Length=2904822 Score = 104 bits (114), Expect = 2e-18 Identities = 310/469 (66%), Gaps = 12/469 (3%) Strand=Plus/Minus Query 9680 GATTCTTTTCCTTAATGTCCTGGGAATTAAGGGAATATTTCGTTGTAACTGAATTACTGA 9739 |||| ||| || | ||| | ||||| | || || | ||| || || || ||| ||| Sbjct 1686490 GATTTTTTGCCATGATGGCGTGGGAGCTTAGAGAGTTTTTTGTGGTCACAGAACATTTGA 1686431 Query 9740 TTAAACAACATTATGTAAAGTTGTTCAAAGGTTTGACCATGGCAGATGATCTCCAAACTG 9799 | ||| || ||||| |||||| | || | ||||||||||| || | | | || | Sbjct 1686430 TCAAAACCCACTATGTTCCATTGTTCCACGGGCTCACCATGGCAGACGACCACAATACAG 1686371 Query 9800 TCATAAAGAAAATGCTTGATACCTCACATGGTCAGGGAACCCGTAC-ATATGATGCCATC 9858 | ||| |||| ||||| | | ||| ||| ||| |||||| | | || | | Sbjct 1686370 TGATAGAGAAGATGCTCGCAGCTTCAGATGCCCAG--AACCCGGAAGACCCGAACCAAGT 1686313 Query 9859 ACCATT--GCCAATAACATAGACTATGAAAAATGGAATAATTATCAGAGAATGGAATCAA 9916 | ||| || ||| || | || || ||| |||||||| | ||| || || | | Sbjct 1686312 AA-ATTACGCGAATCACCTGGATTACTCAAAGTGGAATAACCACCAGCGAGGAGAGGCGA 1686254 Query 9917 ACGGTCCTGTATTCAGAGTAATGGGTCAATTCTTGGGATATCCTAATTTGAT-ACTCAGG 9975 ||| || || || || || |||||||||||| |||| || || || | |||| || Sbjct 1686253 ACGACCCGGTGTTTAGGGTCATGGGTCAATTCCTGGGGCTCCCGAACCTGTTCACTC-GG 1686195 Query 9976 ACCCATGAGTTTTTTCAGAAAAGTTTAATTTATTATAATCAAAGACCTGATTTGATGAGA 10035 ||||||||||| || ||||| | | ||||| || | | || || |||||||| Sbjct 1686194 ACCCATGAGTTCTTCAAGAAATCCCTTGTCTATTACAAAGACCGGCCGGACCTGATGAGA 1686135 Query 10036 GT--AGTTGGGAAAAGTGCTATGAACAGTACTAAACATATCGTGTGCTGGGAAGGGCAGC 10093 || | | ||||| || || || || || | ||||| |||||||| || || Sbjct 1686134 GTGGAATCTGGAAAGGT--CATCAATGCCACCGAAAACATCGTTTGCTGGGAGGGCCAAG 1686077 Query 10094 TGGGTGGTTTAGAAGGGCTGAGACAAAAGGGGTGGAGTGTTGTCAATTA 10142 || || | |||||||| |||| ||||| |||||||| ||||| || Sbjct 1686076 CCGGCGGACTGGAAGGGCTACGACAGAAGGGATGGAGTGTGGTCAACTA 1686028 >seq1107 Length=3620151 Score = 104 bits (114), Expect = 2e-18 Identities = 310/469 (66%), Gaps = 12/469 (3%) Strand=Plus/Minus Query 9680 GATTCTTTTCCTTAATGTCCTGGGAATTAAGGGAATATTTCGTTGTAACTGAATTACTGA 9739 |||| ||| || | ||| | ||||| | || || | ||| || || || ||| ||| Sbjct 2214998 GATTTTTTGCCATGATGGCGTGGGAGCTTAGAGAGTTTTTTGTGGTCACAGAACATTTGA 2214939 Query 9740 TTAAACAACATTATGTAAAGTTGTTCAAAGGTTTGACCATGGCAGATGATCTCCAAACTG 9799 | ||| || ||||| |||||| | || | ||||||||||| || | | | || | Sbjct 2214938 TCAAAACCCACTATGTTCCATTGTTCCACGGGCTCACCATGGCAGACGACCACAATACAG 2214879 Query 9800 TCATAAAGAAAATGCTTGATACCTCACATGGTCAGGGAACCCGTAC-ATATGATGCCATC 9858 | ||| |||| ||||| | | ||| ||| ||| |||||| | | || | | Sbjct 2214878 TGATAGAGAAGATGCTCGCAGCTTCAGATGCCCAG--AACCCGGAAGACCCGAACCAAGT 2214821 Query 9859 ACCATT--GCCAATAACATAGACTATGAAAAATGGAATAATTATCAGAGAATGGAATCAA 9916 | ||| || ||| || | || || ||| |||||||| | ||| || || | | Sbjct 2214820 AA-ATTACGCGAATCACCTTGATTACTCAAAGTGGAATAACCACCAGCGAGGAGAGGCGA 2214762 Query 9917 ACGGTCCTGTATTCAGAGTAATGGGTCAATTCTTGGGATATCCTAATTTGAT-ACTCAGG 9975 ||| || || || || || |||||||||||| |||| || || || | |||| || Sbjct 2214761 ACGACCCGGTGTTTAGGGTCATGGGTCAATTCCTGGGGCTCCCGAACCTGTTCACTC-GG 2214703 Query 9976 ACCCATGAGTTTTTTCAGAAAAGTTTAATTTATTATAATCAAAGACCTGATTTGATGAGA 10035 ||||||||||| || ||||| | | ||||| || | | || || |||||||| Sbjct 2214702 ACCCATGAGTTCTTCAAGAAATCCCTTGTCTATTACAAAGACCGGCCGGACCTGATGAGA 2214643 Query 10036 GT--AGTTGGGAAAAGTGCTATGAACAGTACTAAACATATCGTGTGCTGGGAAGGGCAGC 10093 || | | ||||| || || || || || | ||||| |||||||| || || Sbjct 2214642 GTGGAATCTGGAAAGGT--CATCAATGCCACCGAAAACATCGTTTGCTGGGAGGGCCAAG 2214585 Query 10094 TGGGTGGTTTAGAAGGGCTGAGACAAAAGGGGTGGAGTGTTGTCAATTA 10142 || || | |||||||| |||| ||||| |||||||| ||||| || Sbjct 2214584 CCGGCGGACTGGAAGGGCTACGACAGAAGGGATGGAGTGTGGTCAACTA 2214536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46209898938105