Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_028265.1 Length=12004 Score E Sequences producing significant alignments: (Bits) Value seq112 98.7 8e-17 >seq112 Length=2831899 Score = 98.7 bits (108), Expect = 8e-17 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 2288 GGACATAAGATCAAAATTCTGGATAGTTATGGCTCTGAACGTTACTTTAACTTCTCAAAG 2347 |||||| | ||||| ||||| || || || ||||| || || || |||||||| ||| Sbjct 84892 GGACATGATATCAAGATTCTAGACAGATACGGCTCCACGCGCTATTTCAACTTCTCCAAG 84951 Query 2348 ACAGCCTCTGTTGGATATGTAGAGCTTCCGCAAA--CTTTCAGGAAGATTCAGAAATGTT 2405 | ||||| || | | | || || | ||| |||| ||||||| ||||| || | Sbjct 84952 AATGCCTCGGTAGACAAAATTGAACTCTCACAAGTCCTTT--GGAAGATACAGAAGTGCT 85009 Query 2406 ATGGTGCGAATAACGCATTCATCCCTACTATGGACGAATACATTGCTAGCACTTTCAGTA 2465 ||| ||| | || || ||| |||| || || || || | ||||| || || ||||| | Sbjct 85010 ATGATGCAACGAATGCCTTCCTCCCGACGATCGAGGACTTCATTGGAAGTACATTCAGCA 85069 Query 2466 ACGCGCATAGTGCATCTAAAGT 2487 ||||||||||||| | || ||| Sbjct 85070 ACGCGCATAGTGCGTGTAGAGT 85091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38296550885120