Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_030290.1 Length=10864 Score E Sequences producing significant alignments: (Bits) Value seq570 181 7e-42 seq296 167 2e-37 >seq570 Length=1853759 Score = 181 bits (200), Expect = 7e-42 Identities = 350/510 (69%), Gaps = 11/510 (2%) Strand=Plus/Plus Query 8941 TAATACCATGGGGAAAAAAGAGAAAAAGCCAACCGTGGCTGGTTTG----GCTAAAGGAT 8996 |||||||||||| ||||| || ||||| ||||| || | | | | ||||| || | Sbjct 257983 TAATACCATGGGCAAAAAGGAAAAAAA---AACCGGGGGTTGCTGGAGAAGCTAAGGGGT 258039 Query 8997 CAAGAACAATTTGGTACATGTGGCTTGGAAGTCGTTTCCTCGAGTACGAGGCTCTAGGGT 9056 | | || ||||||||||||||||| || | | ||||| || | || ||||| || | Sbjct 258040 CGCGTACGATTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCT 258099 Query 9057 TCCTCAATGAAGATCATTGGGTAGCCCGCGAGAACTTCCCCTGTGGCGTAGGGGGAGAAG 9116 ||||||| | || || ||||| |||||||||||||| | || |||||||||| | Sbjct 258100 TCCTCAACGCTGACCACTGGGTTAGTCGCGAGAACTTCCCGGGAGGAGTAGGGGGAGTTG 258159 Query 9117 GAGTCAACTACTTTGGCTATTACCTCGAGGACATAGCGAAGCGAGGTAAGTACTTAGTCG 9176 | |||||||||||||| |||| | | ||||| || || | || || | ||| ||| Sbjct 258160 GGGTCAACTACTTTGGGAATTATTTGAAAGACATCGCAAAAAGGGGAAAATTTTTATTCG 258219 Query 9177 CCGATGATGTGGCCGGATGGGACACTCGGATCACGCAAGCGGATTTGGACGATGAAG-AG 9235 ||||||| | || |||||||||||||| || | | ||| |||| || |||| | Sbjct 258220 CCGATGACATTGCTGGATGGGACACTCGTATTAGCTCTGAAGATCTGGAGGACGAAGAAA 258279 Query 9236 TTCTTC-ATCTTAGAACTCATAGATGATCCGTACCACAGGAAACTCGTCCAGTCCTTGTT 9294 ||||| | | || | || |||||| | |||| | ||| | || | Sbjct 258280 CTCTTCTAACGGAGTTGGC-TA-TTGATCCTTTCCACCGTGCACTAATATCCGCCACCAT 258337 Query 9295 CACATTCGCATACAAACATGTGGTGGCTCTGTTTCCAAGGGACCATCCAAAGTACGCGAG 9354 | | |||| ||| | | | || | |||| ||| | |||| | || || | || Sbjct 258338 GAGACTCGCTTACCAGAACATCGTTGTCATGTTCCCACGAACCCATTCTAAATATGGCAG 258397 Query 9355 CGGAACTGTGATGGATGTCGTTGTCCGTACTGATCAACGCGGATCAGGCCAAGTGATAAC 9414 ||||||||||||||||| |||| | | | || ||||||||||| |||||||| | || Sbjct 258398 TGGAACTGTGATGGATGTTGTTGGCAGAAGGGACCAACGCGGATCGGGCCAAGTCGTGAC 258457 Query 9415 GTATGCCATGAATACAATAACGAACGCAAA 9444 || ||| | || || ||||| || | ||| Sbjct 258458 ATACGCCCTAAACACCATAACCAATGGAAA 258487 >seq296 Length=5246318 Score = 167 bits (184), Expect = 2e-37 Identities = 379/570 (66%), Gaps = 0/570 (0%) Strand=Plus/Plus Query 8876 TTCTGGGACATGGTTGATAGAGAGCGAACAAAACATCTGGCCGGAGATTGTGAGATGTGT 8935 |||||| | | |||| ||||||| | ||||||| || | || | |||||| Sbjct 840560 TTCTGGAATCTTGTTGGCCGAGAGCGTGCTCTACATCTGCAAGGGAAATGCAATATGTGT 840619 Query 8936 ATTTATAATACCATGGGGAAAAAAGAGAAAAAGCCAACCGTGGCTGGTTTGGCTAAAGGA 8995 | |||||||| |||||||||||||| || ||||| || |||||| ||| || ||| Sbjct 840620 CTCTATAATACTATGGGGAAAAAAGAAAAGAAGCCCGGAGTTGCTGGTGAGGCAAAGGGA 840679 Query 8996 TCAAGAACAATTTGGTACATGTGGCTTGGAAGTCGTTTCCTCGAGTACGAGGCTCTAGGG 9055 || | || || ||||| |||||||| || || | ||| | |||||||| || || | | Sbjct 840680 TCTCGGACTATCTGGTATATGTGGCTCGGGAGCAGATTCTTGGAGTACGAAGCGCTGGCG 840739 Query 9056 TTCCTCAATGAAGATCATTGGGTAGCCCGCGAGAACTTCCCCTGTGGCGTAGGGGGAGAA 9115 ||||| || | ||| || ||||| ||| ||||| |||||| | || || || || | Sbjct 840740 TTCCTGAACGCAGACCACTGGGTCAGCCGTGAGAATTTCCCCGGAGGAGTTGGCGGTGTT 840799 Query 9116 GGAGTCAACTACTTTGGCTATTACCTCGAGGACATAGCGAAGCGAGGTAAGTACTTAGTC 9175 || |||||||| |||||| |||| ||| |||| || | ||| |||||| | | Sbjct 840800 GGCGTCAACTATTTTGGCAATTATCTCAAGGAGATTTCCTGCAAAGGAAAGTACCTCTTT 840859 Query 9176 GCCGATGATGTGGCCGGATGGGACACTCGGATCACGCAAGCGGATTTGGACGATGAAGAG 9235 || ||||| | || || |||||||| | | | | |||| | || || || || Sbjct 840860 GCGGATGACATTGCTGGTTGGGACACCAAGGTGAGCTCTGAGGATCTTGAAGACGAGGAA 840919 Query 9236 TTCTTCATCTTAGAACTCATAGATGATCCGTACCACAGGAAACTCGTCCAGTCCTTGTTC 9295 || || ||| |||| ||| | || | | || | | | | Sbjct 840920 ACTCTCCTCACAGAGCTCACCCCCAGTCCCTTTCATAAGGCCCTGATATCGGCAACCATG 840979 Query 9296 ACATTCGCATACAAACATGTGGTGGCTCTGTTTCCAAGGGACCATCCAAAGTACGCGAGC 9355 | | || ||| | |||| || ||| ||||||| | |||| || || | ||| Sbjct 840980 AAGCTAGCGTACCAGAATGTTGTCGCTATGTTTCCTCGAACCCATGTCAAATATGGTAGC 841039 Query 9356 GGAACTGTGATGGATGTCGTTGTCCGTACTGATCAACGCGGATCAGGCCAAGTGATAACG 9415 ||||| || |||||||| |||| | || ||||| | || |||||||| || | ||| Sbjct 841040 GGAACCGTAATGGATGTTGTTGGAAGGACCGATCAGAGAGGTTCAGGCCAGGTTGTCACG 841099 Query 9416 TATGCCATGAATACAATAACGAACGCAAAA 9445 || ||| |||| |||||||| |||| |||| Sbjct 841100 TACGCCCTGAACACAATAACCAACGGAAAA 841129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34648650817520