Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_030400.1 Length=10122 Score E Sequences producing significant alignments: (Bits) Value seq296 188 5e-44 seq570 122 6e-24 >seq296 Length=5246318 Score = 188 bits (208), Expect = 5e-44 Identities = 393/577 (68%), Gaps = 14/577 (2%) Strand=Plus/Plus Query 8713 TTTTGGGATCTTGTTGACCGTGAACGGAAGCTCCATCTCCAGGGTGATTGTGAACTCTGC 8772 || ||| ||||||||| ||| || || || ||||| || || | || | | || Sbjct 840560 TTCTGGAATCTTGTTGGCCGAGAGCGTGCTCTACATCTGCAAGGGAAATGCAATATGTGT 840619 Query 8773 GTTTACAACACAATGGGTAAAAAAGAAAAGAAGCCGTCCGCCTTC--GGAGCCGCTAAAG 8830 | || || || ||||| ||||||||||||||||| | | || || | || || | Sbjct 840620 CTCTATAATACTATGGGGAAAAAAGAAAAGAAGCC--CGGAGTTGCTGGTGAGGCAAAGG 840677 Query 8831 GGTCACGTACCATATGGTACATGTGGCTCGGAAGCCGGTTTTTGGAATACGAGGCGCTTG 8890 | || || || || ||||| ||||||||||| ||| | || ||||| ||||| ||||| | Sbjct 840678 GATCTCGGACTATCTGGTATATGTGGCTCGGGAGCAGATTCTTGGAGTACGAAGCGCTGG 840737 Query 8891 GCTTTTTGAACGAGGACCATTGGGTGGCCAGAGACAATTTCCCATGCGGTGTGGGAGGAG 8950 || |||||| ||||| ||||| | | || |||||||| | || || || || | Sbjct 840738 CGTTCCTGAACGCAGACCACTGGGTCAGCCGTGAGAATTTCCCCGGAGGAGTTGGCGGTG 840797 Query 8951 TAGGAGTCAATTATTTTGGCTACTACTTAAAAGAAATAGCTGCCCGC---GGCAAGTGGA 9007 | || ||||| ||||||||| | || | || || || | || || || |||| Sbjct 840798 TTGGCGTCAACTATTTTGGCAATTATCTCAAGGAGAT---TTCCTGCAAAGGAAAGTACC 840854 Query 9008 TGATTGCAGATGACGTTGCGGGTTGGGACA-CAAGAATAACGCAAGCAGATCTTGATGAT 9066 | |||| |||||| |||| |||||||||| |||| | | | | |||||||| || Sbjct 840855 TCTTTGCGGATGACATTGCTGGTTGGGACACCAAGGTGAGCTC-TGAGGATCTTGAAGAC 840913 Query 9067 GA-AATGTTCTTCCTCACAGAACTTGCTGAAACTCCATACCATAAGCGATTGATTGAGGC 9125 || | || |||||||||| || | | ||| | |||||| |||| ||| Sbjct 840914 GAGGAAACTC-TCCTCACAGAGCTCACCCCCAGTCCCTTTCATAAGGCCCTGATATCGGC 840972 Query 9126 AACCTTCAATCTGGCATATAAAAACATTGTCGCCCTGTTTCCGCGCAACCACCCGAAATA 9185 |||| | || || || || | || ||||||| ||||||| || | ||| ||||| Sbjct 840973 AACCATGAAGCTAGCGTACCAGAATGTTGTCGCTATGTTTCCTCGAACCCATGTCAAATA 841032 Query 9186 CCGTAGCGGAACAGTGTTGGATGTCCTCTCACGAACAGATCAAAGAGGATCCGGGCAAGT 9245 |||||||||| || ||||||| | | | || ||||| ||||| || || || || Sbjct 841033 TGGTAGCGGAACCGTAATGGATGTTGTTGGAAGGACCGATCAGAGAGGTTCAGGCCAGGT 841092 Query 9246 AACAACATATGCCTTAAACACAATAACTAATGGCAAA 9282 || || ||| | ||||||||||| || || ||| Sbjct 841093 TGTCACGTACGCCCTGAACACAATAACCAACGGAAAA 841129 >seq570 Length=1853759 Score = 122 bits (134), Expect = 6e-24 Identities = 336/510 (66%), Gaps = 4/510 (1%) Strand=Plus/Plus Query 8779 AACACAATGGGTAAAAAAGAAAAGAAGCCGTCCGCCTTC-GGAGCCGCTAAAGGGTCACG 8837 || || ||||| ||||| ||||| || | | | | |||| ||||| ||||| || Sbjct 257984 AATACCATGGGCAAAAAGGAAAAAAAAACCGGGGGTTGCTGGAGAAGCTAAGGGGTCGCG 258043 Query 8838 TACCATATGGTACATGTGGCTCGGAAGCCGGTTTTTGGAATACGAGGCGCTTGGCTTTTT 8897 ||| || |||||||||||||| || || |||| | |||| || || |||||||| | Sbjct 258044 TACGATTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCTTCCT 258103 Query 8898 GAACGAGGACCATTGGGTGGCCAGAGACAATTTCCCATGCGGTGTGGGAGGAGTAGGAGT 8957 |||| ||||| ||||| | || || ||||| | || || || ||||| || || Sbjct 258104 CAACGCTGACCACTGGGTTAGTCGCGAGAACTTCCCGGGAGGAGTAGGGGGAGTTGGGGT 258163 Query 8958 CAATTATTTTGGCTACTACTTAAAAGAAATAGCTGCCCGCGGCAAGTGGATGATTGCAGA 9017 ||| || ||||| | || || ||||| || || | || || | | | || || Sbjct 258164 CAACTACTTTGGGAATTATTTGAAAGACATCGCAAAAAGGGGAAAATTTTTATTCGCCGA 258223 Query 9018 TGACGTTGCGGGTTGGGACACAAGAATAACGCAAGCAGATCTTGATGATGAA-ATGTTCT 9076 |||| |||| || |||||||| | || | | |||||| || || ||| | ||| Sbjct 258224 TGACATTGCTGGATGGGACACTCGTATTAGCTCTGAAGATCTGGAGGACGAAGAAACTCT 258283 Query 9077 TCCTCACAGAACTTGCTGAAACTCCATACCATAAGCGATTGATTGAGGCAACCTTCAATC 9136 | || || || | ||| ||| | ||| | | || || ||| | | | Sbjct 258284 T-CTAACGGAGTTGGCTATTGATCCTTTCCACCGTGCACTAATATCCGCCACCATGAGAC 258342 Query 9137 TGGCATATAAAAACATTGTCGCCCTGTTTCCGCGCAACCACCCGAAATACCGTAGCGGAA 9196 | || || | ||||| || | | |||| || || | ||| | ||||| | || |||| Sbjct 258343 TCGCTTACCAGAACATCGTTGTCATGTTCCCACGAACCCATTCTAAATATGGCAGTGGAA 258402 Query 9197 CAGTGTTGGATGTCCTCTCACGAACAGATCAAAGAGGATCCGGGCAAGTAACAACATATG 9256 | ||| ||||||| | ||| || ||| | ||||| || ||||| ||||| | Sbjct 258403 CTGTGATGGATGTTGTTGGCAGAAGGGACCAACGCGGATCGGGCCAAGTCGTGACATACG 258462 Query 9257 CCTTAAACACAATAACTAATGGCAAATGTC 9286 || ||||||| ||||| ||||| ||| ||| Sbjct 258463 CCCTAAACACCATAACCAATGG-AAAGGTC 258491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32274315861240