Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031079.1 Length=11843 Score E Sequences producing significant alignments: (Bits) Value seq1594 165 6e-37 seq1774 152 4e-33 seq1107 152 4e-33 >seq1594 Length=5600000 Score = 165 bits (182), Expect = 6e-37 Identities = 410/613 (67%), Gaps = 16/613 (3%) Strand=Plus/Plus Query 6769 CTGGTGATCGGGTTGAAGGGGAAGGAAAGGGAGATCAAGAAGAATGGGAGGTTCTTCGCA 6828 || || |||| |||| || || |||||||| |||||| ||| || || ||||||||| Sbjct 3582688 CTAGTTATCGCCTTGAGGGCTAAAGAAAGGGAAATCAAGGAGATGGGCAGATTCTTCGCA 3582747 Query 6829 CTCATGTCCTGGGACCTTCGGGAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTC 6888 | ||| | ||||| | ||||||| ||| || ||| || | || || || | | Sbjct 3582748 ATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCACCTAATCAAGACCCAC 3582807 Query 6889 TATGTCCCTTTGTTCCAAGGTCTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAG 6948 ||||| || ||||| || || || |||||||| || || | ||| | || | | | ||| Sbjct 3582808 TATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAACACCGTGATCGAGAAG 3582867 Query 6949 ATCCTTGGGTGCACCTTCGGT---CAAGGGCTTGCAGGGTACACTGCAGTTACATTCA-C 7004 || || | ||| || || | ||| | | ||| | | ||| | | | | Sbjct 3582868 ATG-TTAGCTGC--CTCCGATGCACAAAATCCAG-AGGATCCCAACCAGGTCAACTATGC 3582923 Query 7005 TAACCACCTAGATTACGAAAAGTGGAACAACCATCAGAGGCGGGAGGCCACTGACCCGGT 7064 |||||||||||| ||| || |||||||||||||| | | || |||| |||||| || Sbjct 3582924 TAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGT 3582983 Query 7065 TTTCAGAGTGATGGGTCAGTTCTTTGGACTTCCTGAGCTGTTTGTCCGCACCCACGAGTT 7124 |||| |||||||| || || || || || || | ||||| || || |||||||| Sbjct 3582984 GTTCAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGAGTT 3583043 Query 7125 CTTCCAGAAGAGTCTGATCTATTACGGAGAAAGACCAGACCTGATGCAAGTGGTGGA--C 7182 ||| | |||| |||||||| ||| ||| ||||||||||| ||| || | || | | Sbjct 3583044 CTTTCGGAAGTCCCTGATCTACTACAAAGATAGACCAGACCTCATG--AGGGTTGAATCC 3583101 Query 7183 GGAAAAGT--TTCATCCATCGGCGATACTATGGTGGCATGGGAAGGACAAGAAGGAGGGT 7240 || ||||| | || || | || ||| || ||| | || |||| ||| ||| Sbjct 3583102 GGGAAAGTCATAAATGCAAC--AGAACATATCGTTTGTTGGAAGGGCCAAGCAGGCGGGC 3583159 Query 7241 TGGAGGGGTTGAGACAAAAGGGATGGAGTGTCCTTAACCTCTTAGTCATTCTCCGGGAGG 7300 | ||||| || | ||||| |||||||| || | ||| | | | ||| || ||| Sbjct 3583160 TAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTGGGCATCGAGCGTCAGG 3583219 Query 7301 CACTGATCAGAAACACCCAGGTTCTGACCCTTGCTCAGGGAGACAACCAAGTAATCTGTA 7360 | |||| || ||||| | | || || || ||||||||||| |||| || | Sbjct 3583220 CCAAGATCCAGAATACCCATATCAAGTGTCTGGCCCAAGGAGACAACCAGATAATATGCA 3583279 Query 7361 CTCAGTACAAGGT 7373 | |||||||| Sbjct 3583280 CCTTCTACAAGGT 3583292 >seq1774 Length=2904822 Score = 152 bits (168), Expect = 4e-33 Identities = 329/488 (67%), Gaps = 12/488 (2%) Strand=Plus/Minus Query 6790 AAGGAAAGGGAGATCAAGAAGAATGGGAGGTTCTTCGCACTCATGTCCTGGGACCTTCGG 6849 |||||| | ||||||||| ||| ||||| || || || | ||| | ||||| ||| | Sbjct 1686518 AAGGAACGAGAGATCAAGGAGATGGGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGA 1686459 Query 6850 GAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTCTATGTCCCTTTGTTCCAAGGT 6909 |||| ||||| ||| ||| || | || |||| |||||| || |||||||| || Sbjct 1686458 GAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCACGGG 1686399 Query 6910 CTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAGATCCTTGGGTGCACCTTCGGT 6969 || |||||||| || || | || | || | | ||||| || | || |||| | Sbjct 1686398 CTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCG----CAGCTTCAGA 1686343 Query 6970 ---CAAGGGCTTGCAGGGTACACTGCAGTTACATT-CACTAACCACCTAGATTACGAAAA 7025 | || | | | | | || || ||| | | || ||||| |||||| ||| Sbjct 1686342 TGCCCAGAACCCGGAAGACCCGAACCAAGTAAATTACGCGAATCACCTGGATTACTCAAA 1686283 Query 7026 GTGGAACAACCATCAGAGGCGGGAGGCCACTGACCCGGTTTTCAGAGTGATGGGTCAGTT 7085 |||||| ||||| ||| | | ||||| | |||||||| || || || |||||||| || Sbjct 1686282 GTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTCAATT 1686223 Query 7086 CTTTGGACTTCCTGAGCTGTTTGTCCGCACCCACGAGTTCTTCCAGAAGAGTCTGATCTA 7145 | | || || || | ||||| || ||||| ||||||||| |||| || |||| Sbjct 1686222 CCTGGGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTA 1686163 Query 7146 TTACGGAGAAAGACCAGACCTGATGCAAGTGGTGGACGGAAAAGTTTCATCCAT--CGGC 7203 |||| ||| | || ||||||||| ||||| ||||| || |||| || | | Sbjct 1686162 TTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAAAGGT--CATCAATGCCACC 1686105 Query 7204 GATACTATGGTGGCATGGGAAGGACAAGAAGGAGGGTTGGAGGGGTTGAGACAAAAGGGA 7263 || | || || ||||| || |||| || || |||| ||| | |||| |||||| Sbjct 1686104 GAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGA 1686045 Query 7264 TGGAGTGT 7271 |||||||| Sbjct 1686044 TGGAGTGT 1686037 >seq1107 Length=3620151 Score = 152 bits (168), Expect = 4e-33 Identities = 329/488 (67%), Gaps = 12/488 (2%) Strand=Plus/Minus Query 6790 AAGGAAAGGGAGATCAAGAAGAATGGGAGGTTCTTCGCACTCATGTCCTGGGACCTTCGG 6849 |||||| | ||||||||| ||| ||||| || || || | ||| | ||||| ||| | Sbjct 2215026 AAGGAACGAGAGATCAAGGAGATGGGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGA 2214967 Query 6850 GAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTCTATGTCCCTTTGTTCCAAGGT 6909 |||| ||||| ||| ||| || | || |||| |||||| || |||||||| || Sbjct 2214966 GAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCACGGG 2214907 Query 6910 CTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAGATCCTTGGGTGCACCTTCGGT 6969 || |||||||| || || | || | || | | ||||| || | || |||| | Sbjct 2214906 CTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCG----CAGCTTCAGA 2214851 Query 6970 ---CAAGGGCTTGCAGGGTACACTGCAGTTACATT-CACTAACCACCTAGATTACGAAAA 7025 | || | | | | | || || ||| | | || ||||| |||||| ||| Sbjct 2214850 TGCCCAGAACCCGGAAGACCCGAACCAAGTAAATTACGCGAATCACCTTGATTACTCAAA 2214791 Query 7026 GTGGAACAACCATCAGAGGCGGGAGGCCACTGACCCGGTTTTCAGAGTGATGGGTCAGTT 7085 |||||| ||||| ||| | | ||||| | |||||||| || || || |||||||| || Sbjct 2214790 GTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTCAATT 2214731 Query 7086 CTTTGGACTTCCTGAGCTGTTTGTCCGCACCCACGAGTTCTTCCAGAAGAGTCTGATCTA 7145 | | || || || | ||||| || ||||| ||||||||| |||| || |||| Sbjct 2214730 CCTGGGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTA 2214671 Query 7146 TTACGGAGAAAGACCAGACCTGATGCAAGTGGTGGACGGAAAAGTTTCATCCAT--CGGC 7203 |||| ||| | || ||||||||| ||||| ||||| || |||| || | | Sbjct 2214670 TTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAAAGGT--CATCAATGCCACC 2214613 Query 7204 GATACTATGGTGGCATGGGAAGGACAAGAAGGAGGGTTGGAGGGGTTGAGACAAAAGGGA 7263 || | || || ||||| || |||| || || |||| ||| | |||| |||||| Sbjct 2214612 GAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGA 2214553 Query 7264 TGGAGTGT 7271 |||||||| Sbjct 2214552 TGGAGTGT 2214545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37781364998380