Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09]
2,435 sequences; 2,247,306,217 total letters
Query= NC_031079.1
Length=11843
Score E
Sequences producing significant alignments: (Bits) Value
seq1594 165 6e-37
seq1774 152 4e-33
seq1107 152 4e-33
>seq1594
Length=5600000
Score = 165 bits (182), Expect = 6e-37
Identities = 410/613 (67%), Gaps = 16/613 (3%)
Strand=Plus/Plus
Query 6769 CTGGTGATCGGGTTGAAGGGGAAGGAAAGGGAGATCAAGAAGAATGGGAGGTTCTTCGCA 6828
|| || |||| |||| || || |||||||| |||||| ||| || || |||||||||
Sbjct 3582688 CTAGTTATCGCCTTGAGGGCTAAAGAAAGGGAAATCAAGGAGATGGGCAGATTCTTCGCA 3582747
Query 6829 CTCATGTCCTGGGACCTTCGGGAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTC 6888
| ||| | ||||| | ||||||| ||| || ||| || | || || || | |
Sbjct 3582748 ATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCACCTAATCAAGACCCAC 3582807
Query 6889 TATGTCCCTTTGTTCCAAGGTCTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAG 6948
||||| || ||||| || || || |||||||| || || | ||| | || | | | |||
Sbjct 3582808 TATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAACACCGTGATCGAGAAG 3582867
Query 6949 ATCCTTGGGTGCACCTTCGGT---CAAGGGCTTGCAGGGTACACTGCAGTTACATTCA-C 7004
|| || | ||| || || | ||| | | ||| | | ||| | | | |
Sbjct 3582868 ATG-TTAGCTGC--CTCCGATGCACAAAATCCAG-AGGATCCCAACCAGGTCAACTATGC 3582923
Query 7005 TAACCACCTAGATTACGAAAAGTGGAACAACCATCAGAGGCGGGAGGCCACTGACCCGGT 7064
|||||||||||| ||| || |||||||||||||| | | || |||| |||||| ||
Sbjct 3582924 TAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGT 3582983
Query 7065 TTTCAGAGTGATGGGTCAGTTCTTTGGACTTCCTGAGCTGTTTGTCCGCACCCACGAGTT 7124
|||| |||||||| || || || || || || | ||||| || || ||||||||
Sbjct 3582984 GTTCAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGAGTT 3583043
Query 7125 CTTCCAGAAGAGTCTGATCTATTACGGAGAAAGACCAGACCTGATGCAAGTGGTGGA--C 7182
||| | |||| |||||||| ||| ||| ||||||||||| ||| || | || | |
Sbjct 3583044 CTTTCGGAAGTCCCTGATCTACTACAAAGATAGACCAGACCTCATG--AGGGTTGAATCC 3583101
Query 7183 GGAAAAGT--TTCATCCATCGGCGATACTATGGTGGCATGGGAAGGACAAGAAGGAGGGT 7240
|| ||||| | || || | || ||| || ||| | || |||| ||| |||
Sbjct 3583102 GGGAAAGTCATAAATGCAAC--AGAACATATCGTTTGTTGGAAGGGCCAAGCAGGCGGGC 3583159
Query 7241 TGGAGGGGTTGAGACAAAAGGGATGGAGTGTCCTTAACCTCTTAGTCATTCTCCGGGAGG 7300
| ||||| || | ||||| |||||||| || | ||| | | | ||| || |||
Sbjct 3583160 TAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTGGGCATCGAGCGTCAGG 3583219
Query 7301 CACTGATCAGAAACACCCAGGTTCTGACCCTTGCTCAGGGAGACAACCAAGTAATCTGTA 7360
| |||| || ||||| | | || || || ||||||||||| |||| || |
Sbjct 3583220 CCAAGATCCAGAATACCCATATCAAGTGTCTGGCCCAAGGAGACAACCAGATAATATGCA 3583279
Query 7361 CTCAGTACAAGGT 7373
| ||||||||
Sbjct 3583280 CCTTCTACAAGGT 3583292
>seq1774
Length=2904822
Score = 152 bits (168), Expect = 4e-33
Identities = 329/488 (67%), Gaps = 12/488 (2%)
Strand=Plus/Minus
Query 6790 AAGGAAAGGGAGATCAAGAAGAATGGGAGGTTCTTCGCACTCATGTCCTGGGACCTTCGG 6849
|||||| | ||||||||| ||| ||||| || || || | ||| | ||||| ||| |
Sbjct 1686518 AAGGAACGAGAGATCAAGGAGATGGGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGA 1686459
Query 6850 GAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTCTATGTCCCTTTGTTCCAAGGT 6909
|||| ||||| ||| ||| || | || |||| |||||| || |||||||| ||
Sbjct 1686458 GAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCACGGG 1686399
Query 6910 CTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAGATCCTTGGGTGCACCTTCGGT 6969
|| |||||||| || || | || | || | | ||||| || | || |||| |
Sbjct 1686398 CTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCG----CAGCTTCAGA 1686343
Query 6970 ---CAAGGGCTTGCAGGGTACACTGCAGTTACATT-CACTAACCACCTAGATTACGAAAA 7025
| || | | | | | || || ||| | | || ||||| |||||| |||
Sbjct 1686342 TGCCCAGAACCCGGAAGACCCGAACCAAGTAAATTACGCGAATCACCTGGATTACTCAAA 1686283
Query 7026 GTGGAACAACCATCAGAGGCGGGAGGCCACTGACCCGGTTTTCAGAGTGATGGGTCAGTT 7085
|||||| ||||| ||| | | ||||| | |||||||| || || || |||||||| ||
Sbjct 1686282 GTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTCAATT 1686223
Query 7086 CTTTGGACTTCCTGAGCTGTTTGTCCGCACCCACGAGTTCTTCCAGAAGAGTCTGATCTA 7145
| | || || || | ||||| || ||||| ||||||||| |||| || ||||
Sbjct 1686222 CCTGGGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTA 1686163
Query 7146 TTACGGAGAAAGACCAGACCTGATGCAAGTGGTGGACGGAAAAGTTTCATCCAT--CGGC 7203
|||| ||| | || ||||||||| ||||| ||||| || |||| || | |
Sbjct 1686162 TTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAAAGGT--CATCAATGCCACC 1686105
Query 7204 GATACTATGGTGGCATGGGAAGGACAAGAAGGAGGGTTGGAGGGGTTGAGACAAAAGGGA 7263
|| | || || ||||| || |||| || || |||| ||| | |||| ||||||
Sbjct 1686104 GAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGA 1686045
Query 7264 TGGAGTGT 7271
||||||||
Sbjct 1686044 TGGAGTGT 1686037
>seq1107
Length=3620151
Score = 152 bits (168), Expect = 4e-33
Identities = 329/488 (67%), Gaps = 12/488 (2%)
Strand=Plus/Minus
Query 6790 AAGGAAAGGGAGATCAAGAAGAATGGGAGGTTCTTCGCACTCATGTCCTGGGACCTTCGG 6849
|||||| | ||||||||| ||| ||||| || || || | ||| | ||||| ||| |
Sbjct 2215026 AAGGAACGAGAGATCAAGGAGATGGGGAGATTTTTTGCCATGATGGCGTGGGAGCTTAGA 2214967
Query 6850 GAGTACTTTGTATCCACTGAATATCTTATTAAAATGTTCTATGTCCCTTTGTTCCAAGGT 6909
|||| ||||| ||| ||| || | || |||| |||||| || |||||||| ||
Sbjct 2214966 GAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCACGGG 2214907
Query 6910 CTGACCATGGCGGATGATCTGAACTCTGTCACCAAAAAGATCCTTGGGTGCACCTTCGGT 6969
|| |||||||| || || | || | || | | ||||| || | || |||| |
Sbjct 2214906 CTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCG----CAGCTTCAGA 2214851
Query 6970 ---CAAGGGCTTGCAGGGTACACTGCAGTTACATT-CACTAACCACCTAGATTACGAAAA 7025
| || | | | | | || || ||| | | || ||||| |||||| |||
Sbjct 2214850 TGCCCAGAACCCGGAAGACCCGAACCAAGTAAATTACGCGAATCACCTTGATTACTCAAA 2214791
Query 7026 GTGGAACAACCATCAGAGGCGGGAGGCCACTGACCCGGTTTTCAGAGTGATGGGTCAGTT 7085
|||||| ||||| ||| | | ||||| | |||||||| || || || |||||||| ||
Sbjct 2214790 GTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTCAATT 2214731
Query 7086 CTTTGGACTTCCTGAGCTGTTTGTCCGCACCCACGAGTTCTTCCAGAAGAGTCTGATCTA 7145
| | || || || | ||||| || ||||| ||||||||| |||| || ||||
Sbjct 2214730 CCTGGGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTTGTCTA 2214671
Query 7146 TTACGGAGAAAGACCAGACCTGATGCAAGTGGTGGACGGAAAAGTTTCATCCAT--CGGC 7203
|||| ||| | || ||||||||| ||||| ||||| || |||| || | |
Sbjct 2214670 TTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAAAGGT--CATCAATGCCACC 2214613
Query 7204 GATACTATGGTGGCATGGGAAGGACAAGAAGGAGGGTTGGAGGGGTTGAGACAAAAGGGA 7263
|| | || || ||||| || |||| || || |||| ||| | |||| ||||||
Sbjct 2214612 GAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAAGGGA 2214553
Query 7264 TGGAGTGT 7271
||||||||
Sbjct 2214552 TGGAGTGT 2214545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 37781364998380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |