Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031083.1 Length=13169 Score E Sequences producing significant alignments: (Bits) Value seq1594 152 4e-33 >seq1594 Length=5600000 Score = 152 bits (168), Expect = 4e-33 Identities = 370/545 (68%), Gaps = 34/545 (6%) Strand=Plus/Plus Query 8030 CGGGAGTACTTCGTCATAACGGAATACTTGATCAAGTTGTTTTACGTCCCCCTGTTCCTA 8089 ||||||| |||||| | || || || | |||||| || || ||| |||| | Sbjct 3582766 CGGGAGTTCTTCGTTGTCACCGAGCACCTAATCAAGACCCACTATGTGCCCTTGTTTCAT 3582825 Query 8090 AGCCTCACCATGGCCGATGAC-ATGACTTCTGTGATCGCCAAGTTGATGGATAGTTC-GA 8147 |||| ||||||||||| ||| || || | ||||||| ||| || | | | || || Sbjct 3582826 GGCCTAACCATGGCCGACGACCATAACACC-GTGATCGAGAAGATGTTAGCTGCCTCCGA 3582884 Query 8148 TCGGACAGGGCAACCCCGGGTATGA-AACCA--TCGGCTTCGCCAACCACCTGGACTATT 8204 | | ||| || || | | || ||||| || || || |||||||| ||||| | Sbjct 3582885 T-GCACAA---AATCCAGAGGATCCCAACCAGGTCAACTATGCTAACCACCTAGACTACT 3582940 Query 8205 CCTCATGGAATAACCATCAGCGACTCGAGTCGAACGGCCCCATCTTCAAAGTTATGGGTC 8264 || |||||| |||||||| ||| || | || | ||| | ||||| || ||||| | Sbjct 3582941 CCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGTGTTCAAGGTGATGGGCC 3583000 Query 8265 AATTCTTCGGTCTCCCG--TTGATCTTCTGGAGGACTCACGACATCTTTCAACGAAG--C 8320 |||| || |||||||| || | | || || |||||||| |||||| |||| | Sbjct 3583001 AATTTTTGGGTCTCCCAAATTTGTTTACTCGA--ACTCACGAGTTCTTTCG--GAAGTCC 3583056 Query 8321 CTGATTTACTACAATGAAAGACCAGACCTTATGGAATGGACGGGTTCGGAACTCAGGACG 8380 ||||| |||||||| || ||||||||||| ||| ||||| ||| | ||| Sbjct 3583057 CTGATCTACTACAAAGATAGACCAGACCTCATG-------AGGGTT--GAATCCGGGA-- 3583105 Query 8381 AAGCCAGGA--TCCCCAGGAC---CCGTTTGTTGGAACGGACAGGCAGGTGGACTGGAGG 8435 ||| || | | ||| || |||||||||||| || || ||||| || || |||| Sbjct 3583106 AAGTCATAAATGCAACAGAACATATCGTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAGG 3583165 Query 8436 GACTGCGCCAAAAAGGTTGGAGCATTGTCAACCTCCTCGTCATCATGCGGGAAGGAAAGG 8495 | |||||||||||||| |||||| |||| ||| ||| | |||| ||| | | ||| Sbjct 3583166 GCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTGGGCATCGAGCGTCAGGCCAAGA 3583225 Query 8496 TTCGAAATACACTCGTCCGCACCCTTGCGCAAGGGGACAATCAGGTCATATGTACCAGGT 8555 | | ||||| | || || || ||||| ||||| ||| | ||||| ||| | Sbjct 3583226 TCCAGAATACCCATATCAAGTGTCTGGCCCAAGGAGACAACCAGATAATATGCACCTTCT 3583285 Query 8556 ACAAG 8560 ||||| Sbjct 3583286 ACAAG 3583290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42021216872460