Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031215.1 Length=12291 Score E Sequences producing significant alignments: (Bits) Value seq1480 131 1e-26 seq1594 78.8 7e-11 >seq1480 Length=8353993 Score = 131 bits (144), Expect = 1e-26 Identities = 207/294 (70%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 7543 ATTGCAAACCACCTTGATTACGAAAAATGGAACAACCATCAGAGATATCAGTCCACTGAG 7602 || || || ||| | ||||| ||||||||||||||| ||| ||| || ||||| Sbjct 8252950 ATCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTCC 8252891 Query 7603 CCGGTATTTACGGTGAT-GGGAAAGTTTTTGGGTTATCCTAATTTGATTGCCAGGACCCA 7661 || || || || ||||| ||| || ||||||| || |||||| | | ||| | || || Sbjct 8252890 CCCGTTTTCACAGTGATTGGGCAATTTTTTGGACTA-CCTAATCTATTCGCCCGCACGCA 8252832 Query 7662 TGAGTTCTTTGAAAAGAGTTTTATCTATCACGGAGGCAGAGCAGATTTAATGAAAGTTGT 7721 ||| ||||||||||| || || ||| | ||| | | ||||| |||| || || | Sbjct 8252831 TGAATTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGGTCGA 8252772 Query 7722 TAATGGATCGATTGTAAATAAGGACCCTGAAAGGATGGTTTGTTGGCAGGGTCAAAAAGG 7781 |||| | | | ||| |||||| ||||||||| | |||||| | || || || Sbjct 8252771 AGATGGGGTGGTCGCGAATGTGGACCCGGAAAGGATGATGTGTTGGAATGGACAGGCCGG 8252712 Query 7782 TGGGCTAGAAGGACTGAGACAGAAAGGGTGGAGTATCCTGAACTTGCTGGTGAT 7835 || || ||||| ||||||| |||||||||||| | || || || |||| || Sbjct 8252711 AGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAAT 8252658 >seq1594 Length=5600000 Score = 78.8 bits (86), Expect = 7e-11 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 7316 TTATCGGGTTGAAAGAGAAGGAGAGAGAGATCAAAATTAACGGTCGTTTTTTCTCTCTGA 7375 |||||| |||| | |||||||| || |||||| | || || || ||| | ||| Sbjct 5062098 TTATCGCCTTGAGGGCCAAGGAGAGGGAAATCAAAGAAATGGGCCGATTCTTCGCCATGA 5062157 Query 7376 TGTCATGGGATTTGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACATTTTG 7435 || | ||||| | |||| | ||| || | ||||| | ||||||||||| || | || Sbjct 5062158 TGGCTTGGGAACTCCGAGAATTCTTCGTCGTCACTGAGCACCTAATCAAGACCCACTATG 5062217 Query 7436 T-CCCTCTTTTCTATGGTCTAACTATGGCCGATGA-TATGACGACCGTTGTGAGGAAGAT 7493 | |||| |||| |||| ||||| |||||||| || || || |||||| | |||||| Sbjct 5062218 TGCCCTTGTTTC-ATGGCCTAACCATGGCCGACGACCATAAC-ACCGTTATCGAGAAGAT 5062275 Query 7494 G 7494 | Sbjct 5062276 G 5062276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39214925726700