Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031240.1 Length=11541 Score E Sequences producing significant alignments: (Bits) Value seq1480 84.2 2e-12 >seq1480 Length=8353993 Score = 84.2 bits (92), Expect = 2e-12 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 6672 TCGCAGATCATATAGATTACGAAAAATGGAACAATCATCAGAGAGGAGAGGCAAATAATC 6731 |||| |||| || ||||| |||||||||||||| ||| ||| ||||||| | | | Sbjct 8252949 TCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTCCC 8252890 Query 6732 CAACTTTCAAAGTTATGGGACAATTTTTAGGATACCCCAATTTAATTCAGAGAACTCATG 6791 | ||||| ||| || || |||||||| ||| || ||| || | | || |||| Sbjct 8252889 CCGTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCATG 8252830 Query 6792 AAATATTTGAGAAATCATGGATATATTAT 6820 || | ||||| ||||||| ||||||||| Sbjct 8252829 AATTCTTTGAAAAATCATTAATATATTAT 8252801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36814991471700