Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031273.1 Length=11280 Score E Sequences producing significant alignments: (Bits) Value seq1594 98.7 7e-17 >seq1594 Length=5600000 Score = 98.7 bits (108), Expect = 7e-17 Identities = 217/322 (67%), Gaps = 10/322 (3%) Strand=Plus/Plus Query 5798 GGGAAGATTCTTCGCCTTGATGTCTTGGAAGTTAAGAGAGTATTTTGTGATAACGGAATA 5857 ||| ||||||||||| ||||| | ||| | || | |||| || || | || || | Sbjct 3582732 GGGCAGATTCTTCGCAATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCA 3582791 Query 5858 CCTAATCAAGAAGTTTTACTTGCCTCTATTTGGAGCCCTAACTATGGCCGACGACTATGT 5917 ||||||||||| || |||| | ||| | |||||| |||||||||||| || Sbjct 3582792 CCTAATCAAGACCCACTATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAA 3582851 Query 5918 GACTGTCGTGAAAAAGTTGCTTTCTTCCTCCTCTGGTCAAGGACTGTCCGATTATTCT-- 5975 || || | | ||| || | || ||||| || ||| | | || || | Sbjct 3582852 CACCGTGATCGAGAAGATGTTAGCTGCCTCCGATGCACAAAATC---CAGAGGATCCCAA 3582908 Query 5976 -CAAGTCAACTACTCGAATCACCTCGACTATTCTGCGTGGAACAACCACCA--GAGGAAG 6032 || |||||||| | || ||||| ||||| || ||||||||||| || ||||| Sbjct 3582909 CCAGGTCAACTATGCTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGA-- 3582966 Query 6033 GAAGCCACAGACCCGGTCTTTCGAGTGATGGGCGAATTCTTCGGACTACCGAACCTTTTC 6092 ||||||| ||||| || || ||||||||| |||| || || || || || | || Sbjct 3582967 GAAGCCAATGACCCTGTGTTCAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTT 3583026 Query 6093 ACGAGAACTCATGAATTCTTTC 6114 || ||||||| || ||||||| Sbjct 3583027 ACTCGAACTCACGAGTTCTTTC 3583048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35979814350960