Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031301.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq1594 111 1e-20 >seq1594 Length=5600000 Score = 111 bits (122), Expect = 1e-20 Identities = 178/249 (71%), Gaps = 10/249 (4%) Strand=Plus/Plus Query 6527 AAATGGAACAACCATCAAAGAAAAGCTGCAACTGATCCAGTTTTCAAGGTCATGGGAGAG 6586 |||||||||||||||||| || || || | ||| || || |||||||| ||||| | Sbjct 3582943 AAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGTGTTCAAGGTGATGGGCCAA 3583002 Query 6587 TTCTTAGGATATCCC-AACTTATTCACAAGAACTCACGAATTCTTTCAAGAAAGT--CTA 6643 || || || | |||| || || || || |||||||||| ||||||| | |||| || Sbjct 3583003 TT-TTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGAGTTCTTTC--GGAAGTCCCTG 3583059 Query 6644 ATTTACTACAATGGACGACCAGATTTGATGCGTGT--CAACAAAGACAGCTTAACAAATG 6701 || |||||||| | ||||||| | ||| | || | | || || | | ||||| Sbjct 3583060 ATCTACTACAAAGATAGACCAGACCTCATGAGGGTTGAATCCGGGAAAG--TCATAAATG 3583117 Query 6702 CAACAAATCAAATAGTATGTTGGGAAGGTCAAGAAGGTGGATTAGAAGGATTGAGACAAA 6761 ||||| | || || || |||||| | || |||| ||| || |||| || || | |||| Sbjct 3583118 CAACAGAACATATCGTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAA 3583177 Query 6762 AGGGATGGA 6770 | ||||||| Sbjct 3583178 AAGGATGGA 3583186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35413429866780