Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031304.1 Length=10306 Score E Sequences producing significant alignments: (Bits) Value seq1480 109 4e-20 >seq1480 Length=8353993 Score = 109 bits (120), Expect = 4e-20 Identities = 249/371 (67%), Gaps = 14/371 (4%) Strand=Plus/Minus Query 5532 TCGCCAATCATCTAGACTACGAGAAATGGAACAACCATCAACGGAAGGAATCAACTTCTC 5591 |||| ||||| | || || || |||||||||||| |||| | | || | ||||| | Sbjct 8252949 TCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTCCC 8252890 Query 5592 CTGTTTTTACCGTCATGGGGCAATTCCTAGGGCTTCCCAAATTAATAGCTAGGACACACG 5651 | ||||| || || || |||||||| | || || || || || | || | || || | Sbjct 8252889 CCGTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCATG 8252830 Query 5652 AATTTTTTGAACAAAGTTTTATTTACTACGGAGATCGTCCCGATTTGATGACCATCAAGG 5711 |||| |||||| || || || || || |||| ||||| ||| | || | || | | Sbjct 8252829 AATTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGGTCGAAG 8252770 Query 5712 ATGGAGAAATTGTCAACGTCGATGAAAACCAGAAAG-----TCTGCTGGAATGGTCAATT 5766 |||| | | | || || | | || ||||| | || |||||||| || Sbjct 8252769 ATGGGGTGGTCGCGAATGTGG-----ACCCGGAAAGGATGATGTGTTGGAATGGACAGGC 8252715 Query 5767 GGGGGGACTGGAAGGGCTTCGACAAAAAGGATGGAGCGTACTTAATCTTCTTGTGATCTT 5826 || ||||| |||||| | |||||||||| ||||| || || ||| | | || ||| Sbjct 8252714 CGGAGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAATCGA 8252655 Query 5827 AAGAGAATCTAAAATTCGAAACACGAAGGT-CAGA-GTCCTTGCTCAAGGGGACAATCAA 5884 || || || ||||| ||||| ||||| | | || | ||||| || |||||||| Sbjct 8252654 GAGGGAGTCACGCATTCGTAACACTAAGGTGCTCACGT--TAGCTCAGGGTGACAATCAG 8252597 Query 5885 GTGATCTGCAC 5895 || || ||||| Sbjct 8252596 GTCATTTGCAC 8252586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32863099731800