Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031319.1 Length=1454 Score E Sequences producing significant alignments: (Bits) Value seq1363 91.5 1e-15 >seq1363 Length=5884197 Score = 91.5 bits (100), Expect = 1e-15 Identities = 125/174 (72%), Gaps = 8/174 (5%) Strand=Plus/Plus Query 828 GCACACATCCCAAGAGCTGT----CTCCTTATCATCTACTGATTTTGGAGAAGATTTCCC 883 ||| | ||||||||||| || |||||| | || || ||||| |||||||| Sbjct 1783222 GCAAATATCCCAAGAGCGGTATCACTCCTT----GCGACAGACTTTGGCTCTGATTTCCC 1783277 Query 884 CAAGGTTATGCAGACAGTGATAGTGGCATCAATCTTCCCTAAGGGGGCACTGGGTGTCAA 943 || ||||||||||| |||| || | ||||||||||| || || | || ||| | Sbjct 1783278 CAGACAAATGCAGACAGTAATAGCTGCTGCCATCTTCCCTAAAGGACCAATCGGCGTCCA 1783337 Query 944 ACTGATGAAGGCTCTGCTCTTGTACATGATTGAGGAGAATAAGCTTCTGAGTAA 997 ||| ||||| ||||| || | || |||||||||| ||||| || ||||| || Sbjct 1783338 ACTAATGAAAGCTCTACTACTCTATCTGATTGAGGAAAATAAACTACTGAGCAA 1783391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4543882438200