Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_031327.1 Length=10588 Score E Sequences producing significant alignments: (Bits) Value seq296 172 4e-39 seq570 156 3e-34 seq65 143 2e-30 seq1069 102 6e-18 >seq296 Length=5246318 Score = 172 bits (190), Expect = 4e-39 Identities = 355/523 (68%), Gaps = 4/523 (1%) Strand=Plus/Plus Query 8770 TGTGCGTTTATAACACCATGGGGAAGAAAGAAAAGAAGCCGGCCATCTTAGGCAAAGCGA 8829 |||| | ||||| || |||||||| |||||||||||||| | | || | || | Sbjct 840615 TGTGTCTCTATAATACTATGGGGAAAAAAGAAAAGAAGCCCGGAGTTGCTGGTGAGGCAA 840674 Query 8830 AGGGCTCTCGGACCATTTGGTATATGTGGCTAGGCAGTAGATTCTTGGAGTACGAAGCCC 8889 |||| |||||||| || |||||||||||||| || || |||||||||||||||||||| | Sbjct 840675 AGGGATCTCGGACTATCTGGTATATGTGGCTCGGGAGCAGATTCTTGGAGTACGAAGCGC 840734 Query 8890 TAGGATTCTTGAACCAGGACCATTGGGTGTCGCGCGACCACTTGCCATGTGGCGTCGGAG 8949 | | ||| ||||| ||||| ||||| || || | || || | || || || | Sbjct 840735 TGGCGTTCCTGAACGCAGACCACTGGGTCAGCCGTGAGAATTTCCCCGGAGGAGTTGGCG 840794 Query 8950 GCGTCGGGGTCAATTACTTCGGAAACTACCTGAAAGAAATAGCAGGGAAGGGAAGATGGC 9009 | || || ||||| || || || || || || || || || | | || |||| | | Sbjct 840795 GTGTTGGCGTCAACTATTTTGGCAATTATCTCAAGGAGATTTCCTGCAAAGGAAAGTACC 840854 Query 9010 TCATAGCTGATGATGTGGCAGGATGGGACACGCGCATAACGGAATCA-GACATTGAAGAT 9068 || | || ||||| | || || |||||||| | | | | | || ||||||| Sbjct 840855 TCTTTGCGGATGACATTGCTGGTTGGGACACCAAGGTGA-GCTCTGAGGATCTTGAAGAC 840913 Query 9069 GAAAGGGCT-TTGTTGCTGTCCTTAGTCACAGACCCGTATCACATGGCCCTGATTGATTC 9127 || || | | | | || | | ||| ||| | ||| | ||||||||| | Sbjct 840914 GAGGAAACTCTCCTCACAGAGCTCACCCCCAGTCCC-TTTCATAAGGCCCTGATATCGGC 840972 Query 9128 AATCTTCACGATGGCTTACCGCAACATAGTGGCTCTTTTTCCTCGGAACCACAAGAGATT 9187 || | | | | | || |||| || | || ||| | |||||||| | ||| | || Sbjct 840973 AACCATGAAGCTAGCGTACCAGAATGTTGTCGCTATGTTTCCTCGAACCCATGTCAAATA 841032 Query 9188 TGGTAGTGGGACTGTGATGGATGTGGTGTCTCGCACAGATCAACGTGGGTCGGGCCAAGT 9247 |||||| || || || |||||||| || | || ||||| | || || ||||| || Sbjct 841033 TGGTAGCGGAACCGTAATGGATGTTGTTGGAAGGACCGATCAGAGAGGTTCAGGCCAGGT 841092 Query 9248 GGTCACATATGCCTTGAATACAATAACCAACGCTAAAGTCCAA 9290 ||||| || ||| |||| ||||||||||||| ||||||||| Sbjct 841093 TGTCACGTACGCCCTGAACACAATAACCAACGGAAAAGTCCAA 841135 Score = 89.7 bits (98), Expect = 3e-14 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 5254 TCATAATGGATGAGTGCCACTTCCTGGATCCCTTGTCCATAGCCGCGCGCGGAATAATGG 5313 ||||||||||||| || || ||| |||| || ||||||| ||||| || || ||||||| Sbjct 817534 TCATAATGGATGAATGTCATTTCATGGACCCAATGTCCATTGCCGCTCGTGGCATAATGG 817593 Query 5314 AGCATATGCATTCCAAGGGGACGGCGCTCATGTATCTGAGTGCCACCCCACCAGGAC 5370 | || |||| ||||| || | | ||||| |||||||| || |||||||||| Sbjct 817594 AACACCTGCACGAAAAGGGTACCAAGTTGATGTACCTGAGTGCTACTCCACCAGGAC 817650 >seq570 Length=1853759 Score = 156 bits (172), Expect = 3e-34 Identities = 258/367 (70%), Gaps = 4/367 (1%) Strand=Plus/Minus Query 9607 AAAATGAAATCATTGGTCGCTCCCGACTACAGAAAGGAGGAATCGTGAG-TGAGAGTGAA 9665 || ||||||| || || | | | || ||||||||||| ||||||| | || ||| Sbjct 12503 AAGATGAAATAATCGGCAGGAGCAGGCTCCAGAAAGGAGGTCTCGTGAGCTTAGC-TGAG 12445 Query 9666 GGAGCCTGTCTGGCAAAAGCACATGGTCAGATGTGGGCCCTCTACTTTTTCCACCGTCGG 9725 | |||||| |||| || || | | || ||||||||||| || || || ||||||||| Sbjct 12444 AGCGCCTGTATGGCCAAGGCCTACGCACAAATGTGGGCCCTATATTTCTTTCACCGTCGG 12385 Query 9726 GACATGCGATTGGCTTTTGCGGCCATCACGGCAAGTGTACCCTCACACTGGTTTCCAAAG 9785 || | | |||| || || || ||| | | ||||| | |||||||| | Sbjct 12384 GATCAGAGGTTGGGGTTCTGTGCTATAACGTCGGCGATTCCCTCTGATTGGTTTCCTGTG 12325 Query 9786 GGCAGGACATCATGGTCAGTCCACCAAAAACATGAATGGATGACCACCAACGACATGCTG 9845 || | ||||| ||||| ||||||| || ||||| ||||||||||| | || ||||| Sbjct 12324 GGGCGAACATCTTGGTCCATCCACCAGAATCATGAGTGGATGACCACTGATGATATGCTA 12265 Query 9846 GAGGTGTGGAACGACGTATGGATTCGCAACAACCCCT-GGATGAGAGAGAAAGATCCTGT 9904 |||||||| ||||| |||||| |||||||||| | || || || ||||| || || Sbjct 12264 CGAGTGTGGAATGACGTTTGGATTAGCAACAACCCGTGGGTTGCGA-CTAAAGAGCCAGT 12206 Query 9905 CTCGTCATGGAGTTTGGTACCGTACCTGCCAAAGAAGCAGGATATAGCTTGCGGGAGCCG 9964 | ||| ||| | | |||||| ||| |||||||| || ||||| || || || | Sbjct 12205 CATGTCGTGGGATGAAATCCCGTACTTGCATAAGAAGCAAGACATAGCGTGTGGTAGTCT 12146 Query 9965 CATTGGA 9971 ||| ||| Sbjct 12145 CATAGGA 12139 Score = 134 bits (148), Expect = 9e-28 Identities = 350/528 (66%), Gaps = 17/528 (3%) Strand=Plus/Plus Query 8780 TAACACCATGGGGAAGAAAGAAAAGAAG-CCGGCCATCTTAGGCAAAGCGAAGGGCTCTC 8838 ||| |||||||| || || ||||| || |||| | || |||| ||||| || | Sbjct 257983 TAATACCATGGGCAAAAAGGAAAAAAAAACCGGGGGTTGCTGGAGAAGCTAAGGGGTCGC 258042 Query 8839 GGACCATTTGGTATATGTGGCTAGGCAGTAGATTCTTGGAGTACGAAGCCCTAGGATTCT 8898 | || |||||||| |||||||||||| | || ||| | || | ||||| || || ||| Sbjct 258043 GTACGATTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCTTCC 258102 Query 8899 TGAACCAGGACCATTGGGT--GTCGCGCGACCACTTGCCATGTGGCGTCGGAGGCGTCGG 8956 | ||| ||||| ||||| |||||| || |||| || | || || || || || || Sbjct 258103 TCAACGCTGACCACTGGGTTAGTCGCGAGA--ACTTCCCGGGAGGAGTAGGGGGAGTTGG 258160 Query 8957 GGTCAATTACTTCGGAAACTACCTGAAAGAAATAGCAGGGAAGGGAAGATGGCTCATAGC 9016 |||||| ||||| || || || ||||||| || ||| | ||||| || | | || Sbjct 258161 GGTCAACTACTTTGGGAATTATTTGAAAGACATCGCAAAAAGGGGAAAATTTTTATTCGC 258220 Query 9017 TGATGATGTGGCAGGATGGGACACGCGCATAA---CGGAATCAGACATTGAAGATGAAAG 9073 ||||| | || ||||||||||| || || | | || ||| | || || ||| Sbjct 258221 CGATGACATTGCTGGATGGGACACTCGTATTAGCTCTGA---AGATCTGGAGGACGAAGA 258277 Query 9074 GGCTTTGTTGCTGTCCTTAGTCACAGACCCGTATCACATGGCCCTGATTGATTCAATCTT 9133 || | | | || | | || || | ||| || || || | | | | Sbjct 258278 AACTCTTCTAACGGAGTTGGCTATTGATCCTTTCCACCGTGCACTAATATCCGCCACCAT 258337 Query 9134 CACGATGGCTTACCGCAACATAGTGGCTCTTTTTCCTCGGAACCACAAGAGATTTGGTAG 9193 | | ||||||| ||||| || | | || || || | ||| | || ||| || Sbjct 258338 GAGACTCGCTTACCAGAACATCGTTGTCATGTTCCCACGAACCCATTCTAAATATGGCAG 258397 Query 9194 TGGGACTGTGATGGATGTGGTGTCTCGCACA---GATCAACGTGGGTCGGGCCAAGTGGT 9250 ||| |||||||||||||| || | ||| | || ||||| || ||||||||||| || Sbjct 258398 TGGAACTGTGATGGATGTTGT---TGGCAGAAGGGACCAACGCGGATCGGGCCAAGTCGT 258454 Query 9251 CACATATGCCTTGAATACAATAACCAACGCTAAAGTCCAACTTGGCCG 9298 ||||| ||| | || || |||||||| | || ||||| ||| ||| Sbjct 258455 GACATACGCCCTAAACACCATAACCAATGGAAAGGTCCAGGTTGCCCG 258502 >seq65 Length=4361017 Score = 143 bits (158), Expect = 2e-30 Identities = 255/367 (69%), Gaps = 4/367 (1%) Strand=Plus/Minus Query 9607 AAAATGAAATCATTGGTCGCTCCCGACTACAGAAAGGAGGAATCGTGAG-TGAGAGTGAA 9665 || ||||||| || || | | | || |||||| |||| ||||||| | || ||| Sbjct 2220070 AAGATGAAATAATCGGCAGGAGCAGGCTCCAGAAAAGAGGTCTCGTGAGCTTAGC-TGAG 2220012 Query 9666 GGAGCCTGTCTGGCAAAAGCACATGGTCAGATGTGGGCCCTCTACTTTTTCCACCGTCGG 9725 | ||||| |||| || || | | || ||||||||||| || || || ||||||||| Sbjct 2220011 AGCGCCTGCATGGCCAAGGCCTACGCACAAATGTGGGCCCTATATTTCTTTCACCGTCGG 2219952 Query 9726 GACATGCGATTGGCTTTTGCGGCCATCACGGCAAGTGTACCCTCACACTGGTTTCCAAAG 9785 || | | |||| || || || ||| | | ||||| | |||||||| | Sbjct 2219951 GATCAGAGGTTGGGGTTCTGTGCTATAACGTCGGCGATTCCCTCTGATTGGTTTCCTGTG 2219892 Query 9786 GGCAGGACATCATGGTCAGTCCACCAAAAACATGAATGGATGACCACCAACGACATGCTG 9845 || | ||||| ||||| ||||||| || ||||| ||||||||||| | || ||||| Sbjct 2219891 GGGCGAACATCTTGGTCCATCCACCAGAATCATGAGTGGATGACCACTGATGATATGCTA 2219832 Query 9846 GAGGTGTGGAACGACGTATGGATTCGCAACAACCCCT-GGATGAGAGAGAAAGATCCTGT 9904 |||||||| ||||| |||||| ||||||||| | || || || ||||| || || Sbjct 2219831 CGAGTGTGGAATGACGTTTGGATTAGCAACAACCTGTGGGTTGCGA-CTAAAGAGCCAGT 2219773 Query 9905 CTCGTCATGGAGTTTGGTACCGTACCTGCCAAAGAAGCAGGATATAGCTTGCGGGAGCCG 9964 | ||| ||| | | |||||| ||| |||||||| || ||||| || || || | Sbjct 2219772 CATGTCGTGGGATGAAATCCCGTACTTGCATAAGAAGCAAGACATAGCGTGTGGTAGTCT 2219713 Query 9965 CATTGGA 9971 ||| ||| Sbjct 2219712 CATAGGA 2219706 >seq1069 Length=10974945 Score = 102 bits (112), Expect = 6e-18 Identities = 141/196 (72%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 9669 GCCTGTCTGGCAAAAGCACATGGTCAGATGTGGGCCCTCTACTTTTTCCACCGTCGGGAC 9728 ||||| ||| ||||||| | | || ||||||||||| ||||||||||| ||||| ||| Sbjct 4625991 GCCTGCATGGTAAAAGCATACGCCCAAATGTGGGCCCTGTACTTTTTCCATCGTCGTGAC 4626050 Query 9729 ATGCGATTGGCTTTTGCGGCCATCACGGCAAGTGTACCCTCACACTGGTTTCCAAAGGGC 9788 | || |||| ||||| |||||||| | ||| || | |||||||| |||| Sbjct 4626051 CTCCGTTTGGGGTTTGCTGCCATCACATCTGCTGTGCCTAGTGATTGGTTTCCTGAGGGA 4626110 Query 9789 AGGACATC---ATGG--TCAGTCCACCAAAAACATGAATGGATGACCACCAACGACATGC 9843 | | || | || | | |||||||| ||||| |||||||| || | |||||| Sbjct 4626111 AAAATTTCTAGAGGGAAGAACTTCACCAAAACCATGAGTGGATGACAACTGATGACATGT 4626170 Query 9844 TGGAGGTGTGGAACGA 9859 || |||||||||||| Sbjct 4626171 TGCGGGTGTGGAACGA 4626186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 33765475011680