Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_033694.1 Length=10095 Score E Sequences producing significant alignments: (Bits) Value seq296 118 7e-23 seq570 87.8 1e-13 seq65 84.2 1e-12 >seq296 Length=5246318 Score = 118 bits (130), Expect = 7e-23 Identities = 157/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 8747 TCTATAACACGATGGGAAAGAAAGAAAAGAAGCCATCTGCCTT--TGGCACTGCGAAAGG 8804 ||||||| || ||||| || |||||||||||||| | | || ||| || || || Sbjct 840621 TCTATAATACTATGGGGAAAAAAGAAAAGAAGCC--CGGAGTTGCTGGTGAGGCAAAGGG 840678 Query 8805 TTCACGCACCATCTGGTATATGTGGCTGGGTAGCCGTTATTTAGAGTACGAGGCTTTAGG 8864 || || || ||||||||||||||||| || ||| | | || |||||||| || | | Sbjct 840679 ATCTCGGACTATCTGGTATATGTGGCTCGGGAGCAGATTCTTGGAGTACGAAGCGCTGGC 840738 Query 8865 ATTCTTGAACGAAGATCATTGGGTTGCACGAGAAAACTTTCCATGTGGAGTCGGTGGCGT 8924 ||| |||||| ||| || ||||| || || || || || | ||||| || || || Sbjct 840739 GTTCCTGAACGCAGACCACTGGGTCAGCCGTGAGAATTTCCCCGGAGGAGTTGGCGGTGT 840798 Query 8925 CGGCGTTAACTATTTTGGATATTACCTGAAGGAAAT 8960 ||||| ||||||||||| |||| || ||||| || Sbjct 840799 TGGCGTCAACTATTTTGGCAATTATCTCAAGGAGAT 840834 Score = 91.5 bits (100), Expect = 9e-15 Identities = 187/278 (67%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 7510 TACAAAGTCAGAGGCGTGAATGAAACTGATAAAGGAGCCTACGTGTCGCGAGGTGGTTTA 7569 ||||||||||| || || ||||| |||| || | ||| ||||| || || || | Sbjct 831881 TACAAAGTCAGGGGAGTCAATGAGACTGGGCGTGGTGACTATGTGTCTCGCGGAGGCCTG 831940 Query 7570 AAAATGAACGAGATTATCAACAAGCATGCGTGGGAACCTCGAGGAGTTGTCGTTGACCTG 7629 ||| || | ||||| ||| ||||| | ||||| ||| ||| ||| || ||||| Sbjct 831941 AAATTGGATGAGATAATCCACAAGTACAAGTGGGCCCCTATAGGCCATGTGGTGGACCTC 832000 Query 7630 GGATGTGGACGAGGAGGTTGGTCCCAGCGCTTGGTGATGGATTACCGCGTCGCTGAAGTA 7689 ||||| ||||| || |||||| ||| ||| ||| ||||| | ||| | ||| Sbjct 832001 GGATGCGGACGCGGCGGTTGGAGCCAACGCGCGGTCATGGAAGAAACCGTGACGTCAGTG 832060 Query 7690 AGAGGATACACACTTGGAGGCAAAGAACGTGAGAATCCCCAACCGTTCCAAACGAAAGGA 7749 |||||||| | || || ||| || || ||||| ||||| ||| || Sbjct 832061 CAGGGATACACCATCGGTGGGGCGGAAAAGGAAAACCCCCAGAGGTTCCTAACTCGCGGC 832120 Query 7750 TATAACTTGGCGAATTTGAAGGCTGGAGTTGACGTCTA 7787 || || | || | ||||| |||||||||||||| || Sbjct 832121 TACAATCTAGCCACCTTGAAAGCTGGAGTTGACGTTTA 832158 >seq570 Length=1853759 Score = 87.8 bits (96), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 9649 GCGAAGGCTCACGCGCAGATGTGGGCCCTTTACTTCTTCCATCGGCGAGACTTACGGATT 9708 || ||||| |||| || ||||||||||| || ||||| || || || || || | Sbjct 12432 GCCAAGGCCTACGCACAAATGTGGGCCCTATATTTCTTTCACCGTCGGGATCAGAGGTTG 12373 Query 9709 GGATTCGCGGCCATCACATCA---ATTGTGCCTATCAACTGGGTGCCGACGGGCAGGATA 9765 || ||| || || || || ||| ||| | | ||| | || ||| | | | Sbjct 12372 GGGTTCTGTGCTATAACGTCGGCGATTC--CCTCTGAT-TGGTTTCCTGTGGGGCGAACA 12316 Query 9766 TCATGGTCTATCCACCAGAACGCAGAGTGGATGACGACTGAGGATATGCTAACGGTTTGG 9825 || ||||| ||||||||||| ||||||||||| ||||| ||||||||| || ||| Sbjct 12315 TCTTGGTCCATCCACCAGAATCATGAGTGGATGACCACTGATGATATGCTACGAGTGTGG 12256 Query 9826 AACAACGTGTGGATTAGGGACAATCCGTGG 9855 || |||| |||||||| |||| |||||| Sbjct 12255 AATGACGTTTGGATTAGCAACAACCCGTGG 12226 >seq65 Length=4361017 Score = 84.2 bits (92), Expect = 1e-12 Identities = 150/216 (69%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 9643 TGCTTAGCGAAGGCTCACGCGCAGATGTGGGCCCTTTACTTCTTCCATCGGCGAGACTTA 9702 ||| | || ||||| |||| || ||||||||||| || ||||| || || || || Sbjct 2220005 TGCATGGCCAAGGCCTACGCACAAATGTGGGCCCTATATTTCTTTCACCGTCGGGATCAG 2219946 Query 9703 CGGATTGGATTCGCGGCCATCACATCA---ATTGTGCCTATCAACTGGGTGCCGACGGGC 9759 || | || ||| || || || || ||| ||| | | ||| | || ||| Sbjct 2219945 AGGTTGGGGTTCTGTGCTATAACGTCGGCGATTC--CCTCTGAT-TGGTTTCCTGTGGGG 2219889 Query 9760 AGGATATCATGGTCTATCCACCAGAACGCAGAGTGGATGACGACTGAGGATATGCTAACG 9819 | | ||| ||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct 2219888 CGAACATCTTGGTCCATCCACCAGAATCATGAGTGGATGACCACTGATGATATGCTACGA 2219829 Query 9820 GTTTGGAACAACGTGTGGATTAGGGACAATCCGTGG 9855 || ||||| |||| |||||||| |||| | |||| Sbjct 2219828 GTGTGGAATGACGTTTGGATTAGCAACAACCTGTGG 2219793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32187918228060