Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_034204.1 Length=10897 Score E Sequences producing significant alignments: (Bits) Value seq296 333 2e-87 seq570 233 1e-57 seq65 150 1e-32 seq1791 78.8 6e-11 >seq296 Length=5246318 Score = 333 bits (368), Expect = 2e-87 Identities = 766/1143 (67%), Gaps = 28/1143 (2%) Strand=Plus/Plus Query 8528 ACCTGGTTCGTGGACAACAATCACCCATATCAAACCTTCAAATATCACGGCTCGTATGTC 8587 || |||||| ||| | |||| || || ||| |||| ||| ||| || | ||| Sbjct 840136 ACTTGGTTCACCGACCCCGATCATCCCTACAAAAGCTTCTGCTATTTCGGGTCTTTTGTG 840195 Query 8588 ACCGACGACGTCCCCACAGGAGGTCAGACGGTCAACCCGCTAGTGCGAAAGATCATGTGG 8647 || || || || ||||| ||| | || |||||||| || | ||| | |||||| Sbjct 840196 ACTGATGATGTTAAAGTTGGAGGACAGGCTGTTAACCCGCTGGTTAGGAAGCTGATGTGG 840255 Query 8648 CCTTGGGAGGCCGTAG---GAGGTGTCACAAATTTCATGATGACTGACGTCTCGACGTAC 8704 || |||||| | || | | ||||| ||| | |||||||||||||| || || Sbjct 840256 CCGTGGGAGACGGTCACTAGCGTTGTCAGC---TTCTTAATGACTGACGTCTCCACCTAT 840312 Query 8705 GCCCAGCAGAAAGTCCTTCGAGAGAAGGTTGACACAGCTGTGCCTGAACCGAATGAGCAG 8764 |||||||||| || || || |||||||||||||| | | | || || | | Sbjct 840313 TCCCAGCAGAAGGTTCTGCGGGAGAAGGTTGACACCGTTATTCCCCCCCCCCCCC--CCG 840370 Query 8765 ATAAAAAT------GGTAAACCGGAAG--ATTATGAAACAAATGGTTCGGATGTTCAGAG 8816 | |||| ||| ||| ||| || | | || | |||||||| |||| || Sbjct 840371 CCACAAATTCGTTTGGTTAACA--AAGCCATAACGCGCCACTTTGTTCGGATCTTCAAAG 840428 Query 8817 CCAAGAAGATGGTGCCTCGGATGTTGAGCCCGGAAGAGTTCAAGAAGAACGTAAG-ACCG 8875 || || | || ||||| ||| ||| || |||| |||||| | | | Sbjct 840429 AGAAAAACCTCCGACCCCGGATCATGACGAAGGAGGAATTCATTGCAAACGTACGTAATG 840488 Query 8876 ACGCCGCCATCGGATCCTGGAGCCAAGATGTTCCTTGGCGAAAAAGTGAATGAGGCTCTG 8935 | |||||||| ||||| ||||||| ||| | || ||| || | ||| | |||| || Sbjct 840489 ATGCCGCCATAGGATCATGGAGCCGCGATATCCCCTGGAGAGAT-GTGCAGGAGGTGGTG 840547 Query 8936 CAATCCCCCGAATTCTGGGAACTGGTCGACCGCGAACGATCCCTGCATCTCAAAGGAGAC 8995 ||| || |||||| | || || | ||| || || | || ||||| |||| | Sbjct 840548 CAAGACCAGTCCTTCTGGAATCTTGTTGGCCGAGAGCGTGCTCTACATCTGCAAGGGAAA 840607 Query 8996 TGCGAGATGTGCGTGTACAACACAATGGGGAAGAAAGAAAAGAAACCGACGGTGGCTGGA 9055 ||| | ||||| | || || || |||||||| ||||||||||| || || ||||| Sbjct 840608 TGCAATATGTGTCTCTATAATACTATGGGGAAAAAAGAAAAGAAGCCCGGAGTTGCTGGT 840667 Query 9056 GAACCAAAAGGGTCAAGAACCATTTGGTACATGTGGCTCGGCAGTCGCTACCTTGAATAC 9115 || |||| || || | || || ||||| ||||||||||| || | | | | || ||| Sbjct 840668 GAGGCAAAGGGATCTCGGACTATCTGGTATATGTGGCTCGGGAGCAGATTCTTGGAGTAC 840727 Query 9116 GAGGCCCTCGGATTTCTCAATGAGGACCATTGGGTTGCTCGGGAAAACTTCCCGGGTGGG 9175 || || || | || || || | ||||| ||||| || || || ||||| || || Sbjct 840728 GAAGCGCTGGCGTTCCTGAACGCAGACCACTGGGTCAGCCGTGAGAATTTCCCCGGAGGA 840787 Query 9176 GTCGGCGGCCAAGGCGTGAACTATTTTGGCAACTACCTGAAGGAAATATCGCGGAAGGGG 9235 || ||||| ||||| |||||||||||||| || || ||||| || || | || || Sbjct 840788 GTTGGCGGTGTTGGCGTCAACTATTTTGGCAATTATCTCAAGGAGATTTCCTGCAAAGGA 840847 Query 9236 AAGTACTTTGTGGCTGACGACATCGCAGGATGGGACACTCGGATCAGCCAGGCAGATCTG 9295 |||||| | | || || ||||| || || |||||||| | | ||| | ||||| Sbjct 840848 AAGTACCTCTTTGCGGATGACATTGCTGGTTGGGACACCAAGGTGAGCTCTGAGGATCTT 840907 Query 9296 GCCGATGAGGAGTTTTTTATC-CTGAGCATGATCCAAGATCCGTATCACCGAGCCC---T 9351 | || ||||| | | || | |||| | | || ||| | ||| |||| | Sbjct 840908 GAAGACGAGGAAACTCTCCTCACAGAGC-TCACCCCCAGTCCCTTTCATAAGGCCCTGAT 840966 Query 9352 AGCAGAAACCGTCATGAGGTTTGCCTACCAAAACATCGTGGCCCTGTTTCCCCGAGCCCA 9411 | | | ||| ||||| | | || ||||| || | || || ||||||| ||| |||| Sbjct 840967 ATCGGCAAC---CATGAAGCTAGCGTACCAGAATGTTGTCGCTATGTTTCCTCGAACCCA 841023 Query 9412 CAAAAAATTTGGGAGTGGAACGGTCATGGATGTTGTCTCAAGGTCCGACCAGAGGGGGTC 9471 |||| ||| || ||||| || ||||||||||| |||| |||| ||||| || || Sbjct 841024 TGTCAAATATGGTAGCGGAACCGTAATGGATGTTGTTGGAAGGACCGATCAGAGAGGTTC 841083 Query 9472 TGGCCAGGTAGTCACGTATGCCCTCAACACCATCACGAACGGAAAAGTCCAAATTGGACG 9531 |||||||| |||||||| ||||| ||||| || || ||||||||||||||||| | || Sbjct 841084 AGGCCAGGTTGTCACGTACGCCCTGAACACAATAACCAACGGAAAAGTCCAAATAGCTCG 841143 Query 9532 CATGCTGGAAAGTGAGGGCTTGCTCGAGGCTGACGGAGATGTGATTGAACGATGGCTGGA 9591 | ||| |||||||| || |||||| | |||||| ||| ||||| |||||||| Sbjct 841144 GACGCTAGAAAGTGAAGGATTGCTCAATGCTGACCTTCCTGTCATTGAGCGATGGCTCTC 841203 Query 9592 ACGAAACATGGAGCAACGCCTCTCCTGCATGGTGATTGCCGGGGATGATGTTGTTGTCGC 9651 | ||| ||||| | ||| |||||| ||||| || || || || || || | Sbjct 841204 AGAGAACCTGGAGGATGTGCTCGGAAACATGGTCATTGCTGGCGACGACGTAGTGGTGTC 841263 Query 9652 CAC 9654 ||| Sbjct 841264 CAC 841266 Score = 91.5 bits (100), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 7767 AAAGTTTCAAGTCGAGGTGCGTCGACGAGACCCCCCGAGGAGATTATGTCTCGCGGGGAG 7826 ||||| ||||| ||| | ||| | ||||| || || || ||||| || || |||| Sbjct 831877 AAAGTACAAAGTC-AGGGGAGTCAATGAGACTGGGCGTGGTGACTATGTGTCTCGCGGAG 831935 Query 7827 GGCTGAAGATGACAGAACTGATCAACAAGCACGGGTGGAAACCTGAAGGGAAAGTAGTTG 7886 | ||||| || || | ||| ||||| || |||| ||| ||| | || || | Sbjct 831936 GCCTGAAATTGGATGAGATAATCCACAAGTACAAGTGGGCCCCTATAGGCCATGTGGTGG 831995 Query 7887 ACCTGGGCTGTGGTCGAGGGGGTTGGACCCAAAGAATGGTGATGGAAGACCGGGTGAC-T 7945 |||| || || || || || ||||||| |||| | ||| |||||||| ||||| | Sbjct 831996 ACCTCGGATGCGGACGCGGCGGTTGGAGCCAACGCGCGGTCATGGAAGAAACCGTGACGT 832055 Query 7946 CACGTTGATGGTTACACCCTTGGAGGTGAGGAACGGGAAAACCCCCAGAAGTTC 7999 || || | || |||||| | || || | |||| |||||||||||||| |||| Sbjct 832056 CA-GTGCAGGGATACACCATCGGTGGGGCGGAAAAGGAAAACCCCCAGAGGTTC 832108 >seq570 Length=1853759 Score = 233 bits (258), Expect = 1e-57 Identities = 447/649 (69%), Gaps = 15/649 (2%) Strand=Plus/Plus Query 9014 AACACAATGGGGAAGAAAGAAAAGAAA-CCGACGGTGGCTGGAGAACCAAAAGGGTCAAG 9072 || || ||||| || || ||||| ||| ||| ||| ||||||||| | || ||||| | Sbjct 257984 AATACCATGGGCAAAAAGGAAAAAAAAACCGGGGGTTGCTGGAGAAGCTAAGGGGTCGCG 258043 Query 9073 AACCATTTGGTACATGTGGCTCGGCAGTCGCTACCTTGAATACGAGGCCCTCGGATTTCT 9132 || ||||||||||||||||| ||| | | | ||| |||| || || || || || || Sbjct 258044 TACGATTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCTTCCT 258103 Query 9133 CAATGAGGACCATTGGGTTGCTCGGGAAAACTTCCCGGGTGGGGTCGGCGGCCAAGGCGT 9192 ||| | ||||| |||||| ||| || ||||||||||| || || || || || || Sbjct 258104 CAACGCTGACCACTGGGTTAGTCGCGAGAACTTCCCGGGAGGAGTAGGGGGAGTTGGGGT 258163 Query 9193 GAACTATTTTGGCAACTACCTGAAGGAAATATCGCGGAA--GGGGAAGTACTTTGTGGCT 9250 ||||| ||||| || || |||| | | ||||| || ||| || | || | || Sbjct 258164 CAACTACTTTGGGAATTATTTGAA--AGACATCGCAAAAAGGGGAAAATTTTTATTCGCC 258221 Query 9251 GACGACATCGCAGGATGGGACACTCGGATCAGCCAGGCAGATCTGGCCGATGAGGAGTTT 9310 || ||||| || |||||||||||||| || ||| | |||||||| || || || | Sbjct 258222 GATGACATTGCTGGATGGGACACTCGTATTAGCTCTGAAGATCTGGAGGACGAAGAAACT 258281 Query 9311 TTTAT-CCTGAGCATGATCCAAGATCCGTATCACCGAGCCCTAGCAGAAACCGTCATGAG 9369 || | | ||| || ||||| | ||||| || ||| | || |||||| Sbjct 258282 CTTCTAACGGAG-TTGGCTATTGATCCTTTCCACCGTGCACTAATATCCGCCACCATGAG 258340 Query 9370 GTTTGCCTACCAAAACATCGTGGCCCTGTTTCCCCGAGCCCACAAAAAATTTGGGAGTGG 9429 | || ||||| |||||||| | | |||| || ||| |||| |||| ||| ||||| Sbjct 258341 ACTCGCTTACCAGAACATCGTTGTCATGTTCCCACGAACCCATTCTAAATATGGCAGTGG 258400 Query 9430 AACGGTCATGGATGTTGT---CTCAAGGTCCGACCAGAGGGGGTCTGGCCAGGTAGTCAC 9486 ||| || ||||||||||| | |||| ||||| | || || ||||| || || || Sbjct 258401 AACTGTGATGGATGTTGTTGGCAGAAGG---GACCAACGCGGATCGGGCCAAGTCGTGAC 258457 Query 9487 GTATGCCCTCAACACCATCACGAACGGAAAAGTCCAAATTGGACGCATGCTGGAAAGTGA 9546 || ||||| |||||||| || || ||||| ||||| ||| || ||| |||| ||||| Sbjct 258458 ATACGCCCTAAACACCATAACCAATGGAAAGGTCCAGGTTGCCCGTATGTTGGAGAGTGA 258517 Query 9547 GGGCTTGCT-CGAGGCTGACGGAGATGTGATTGAACGATGGCTGGAACGAAACATGGAGC 9605 || ||| | | | || || ||||||| | |||||||| ||||||||| Sbjct 258518 CGGTTTGTTGCACGCCTCAC-CCCTTGTGATTAATAAATGGCTGGCTGATAACATGGAGA 258576 Query 9606 AACGCCTCTCCTGCATGGTGATTGCCGGGGATGATGTTGTTGTCGCCAC 9654 | ||| |||| || || |||||||| || ||||| |||| Sbjct 258577 GAATTCTCGGAGATATGGGTATCGCTGGGGATGACGTCGTTGTGTCCAC 258625 Score = 154 bits (170), Expect = 1e-33 Identities = 279/405 (69%), Gaps = 6/405 (1%) Strand=Plus/Minus Query 9824 GTCCCCTGCCGTCATGAGGATGAAATAGTGGGAAGAAGTCGGATCCAGAAGGGAGGCCTC 9883 || || ||| | || || ||||||||| | || || || || ||||||| ||||| ||| Sbjct 12519 GTGCCTTGCAGGCACGAAGATGAAATAATCGGCAGGAGCAGGCTCCAGAAAGGAGGTCTC 12460 Query 9884 GTTAGTTTTGCGGAGAGTGCCTGCTTGGCAAAGGCCCATGGGCAGATGTGGGCCCTGTAT 9943 || || || || ||||| ||||| |||| |||||| | | || ||||||||||| ||| Sbjct 12459 GTGAGCTTAGCTGAGAGCGCCTGTATGGCCAAGGCCTACGCACAAATGTGGGCCCTATAT 12400 Query 9944 TTCTTCCATCGGCGGGACCTAAGAATGGGTTTCGCGGCAATAAATGCGTCCGTGCCGATA 10003 ||||| || || ||||| | || |||| ||| || |||| || | | || Sbjct 12399 TTCTTTCACCGTCGGGATCAGAGGTTGGGGTTCTGTGCTATAACGTCGGCGATTCCCTCT 12340 Query 10004 AACTGGGTGCCAGAAGGACGCACATCCTGGTCAATTCACCAGCAGTATGAGTGGATGACC 10063 | ||| | || | || || ||||| ||||| || |||||| | |||||||||||||| Sbjct 12339 GATTGGTTTCCTGTGGGGCGAACATCTTGGTCCATCCACCAGAATCATGAGTGGATGACC 12280 Query 10064 ACAGAAGATATGTTGGAGGTATGGAACCGAGTGTGGATCCTGAACAATCCCT-GGATGAG 10122 || || |||||| | || ||||| || ||||| ||||| || | || || | Sbjct 12279 ACTGATGATATGCTACGAGTGTGGAATGACGTTTGGATTAGCAACAACCCGTGGGTTGCG 12220 Query 10123 GGATAAGACCC--CCCTGGACTCATGGCAAGATGTGCCATACCTGCACAAGAAGCAAGAT 10180 |||| || | || || ||| | || | || ||| |||| ||||||||||| Sbjct 12219 ACTAAAGAGCCAGTCATG---TCGTGGGATGAAATCCCGTACTTGCATAAGAAGCAAGAC 12163 Query 10181 ATCGAGTGTGGGAGTCAAATCGGGGAAAAAAGCAGGGCCACCTGG 10225 || | |||||| |||| || || |||| || || |||||| Sbjct 12162 ATAGCGTGTGGTAGTCTCATAGGATCAAAAGAGAGAGCTACCTGG 12118 >seq65 Length=4361017 Score = 150 bits (166), Expect = 1e-32 Identities = 278/405 (69%), Gaps = 6/405 (1%) Strand=Plus/Minus Query 9824 GTCCCCTGCCGTCATGAGGATGAAATAGTGGGAAGAAGTCGGATCCAGAAGGGAGGCCTC 9883 || || ||| | || || ||||||||| | || || || || ||||||| |||| ||| Sbjct 2220086 GTGCCTTGCAGGCACGAAGATGAAATAATCGGCAGGAGCAGGCTCCAGAAAAGAGGTCTC 2220027 Query 9884 GTTAGTTTTGCGGAGAGTGCCTGCTTGGCAAAGGCCCATGGGCAGATGTGGGCCCTGTAT 9943 || || || || ||||| |||||| |||| |||||| | | || ||||||||||| ||| Sbjct 2220026 GTGAGCTTAGCTGAGAGCGCCTGCATGGCCAAGGCCTACGCACAAATGTGGGCCCTATAT 2219967 Query 9944 TTCTTCCATCGGCGGGACCTAAGAATGGGTTTCGCGGCAATAAATGCGTCCGTGCCGATA 10003 ||||| || || ||||| | || |||| ||| || |||| || | | || Sbjct 2219966 TTCTTTCACCGTCGGGATCAGAGGTTGGGGTTCTGTGCTATAACGTCGGCGATTCCCTCT 2219907 Query 10004 AACTGGGTGCCAGAAGGACGCACATCCTGGTCAATTCACCAGCAGTATGAGTGGATGACC 10063 | ||| | || | || || ||||| ||||| || |||||| | |||||||||||||| Sbjct 2219906 GATTGGTTTCCTGTGGGGCGAACATCTTGGTCCATCCACCAGAATCATGAGTGGATGACC 2219847 Query 10064 ACAGAAGATATGTTGGAGGTATGGAACCGAGTGTGGATCCTGAACAATCCCT-GGATGAG 10122 || || |||||| | || ||||| || ||||| ||||| | | || || | Sbjct 2219846 ACTGATGATATGCTACGAGTGTGGAATGACGTTTGGATTAGCAACAACCTGTGGGTTGCG 2219787 Query 10123 GGATAAGACCC--CCCTGGACTCATGGCAAGATGTGCCATACCTGCACAAGAAGCAAGAT 10180 |||| || | || || ||| | || | || ||| |||| ||||||||||| Sbjct 2219786 ACTAAAGAGCCAGTCATG---TCGTGGGATGAAATCCCGTACTTGCATAAGAAGCAAGAC 2219730 Query 10181 ATCGAGTGTGGGAGTCAAATCGGGGAAAAAAGCAGGGCCACCTGG 10225 || | |||||| |||| || || |||| || || |||||| Sbjct 2219729 ATAGCGTGTGGTAGTCTCATAGGATCAAAAGAGAGAGCTACCTGG 2219685 >seq1791 Length=5469670 Score = 78.8 bits (86), Expect = 6e-11 Identities = 139/203 (68%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 9893 GCGGAGAGTGCCTGCTTGGCAAAGGCCCATGGGCAGATGTGGGCCCTGTATTTCTTCCAT 9952 || |||||||||||| ||| ||| || | | || |||||||||||| | || |||||| Sbjct 1196110 GCAGAGAGTGCCTGCATGGTAAAAGCATACGCCCAAATGTGGGCCCTGCACTTTTTCCAT 1196051 Query 9953 CGGCGGGACCTAAGAATGGGTTTCGCGGCAATAAATGCGTCCGTGCCGATAAACTGGGTG 10012 || || ||||| | |||| || || || || | | | ||||| | | ||| | Sbjct 1196050 CGTCGTGACCTCCGTTTGGGGTTTGCTGCCATCACATCTGCTGTGCCTAGTGATTGGTTT 1195991 Query 10013 CCAGAAGGACGCACATCCTGGTCAA-----TTCACCAGCAGTATGAGTGGATGACCACAG 10067 || | ||| ||| || || || |||||| | ||||||||||||| || | Sbjct 1195990 CCTGGGGGAAGCAACTCTTGAGGAAAGAACCTCACCAAAACCATGAGTGGATGACAACTG 1195931 Query 10068 AAGATATGTTGGAGGTATGGAAC 10090 | || |||||| ||| |||||| Sbjct 1195930 ATGACATGTTGCGGGTGTGGAAC 1195908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34754247924740