Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_002526.1
Length=14900
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 304 1e-78
>seq1802
Length=132586
Score = 304 bits (336), Expect = 1e-78
Identities = 619/902 (69%), Gaps = 32/902 (4%)
Strand=Plus/Minus
Query 9962 CCAGCAACAAATTGGCCAGAATTTCTCAAGGCGGTGAATGATTATGGTTTAGATTGGGAA 10021
|| |||||| | ||| | ||| | || | ||| |||||| |||||||||| ||||
Sbjct 31143 CCCGCAACAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAA 31084
Query 10022 AAATTGGTAATTGGACTAAAGGCTAAGGAAAGAGAGCTTAAAGAAGAAGGGAGGtttttt 10081
| | || || ||| || || ||||| || | ||||| | ||| || ||||||
Sbjct 31083 TATCTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTT 31024
Query 10082 tCATTAATGTCTTATGAATTAAGGGATTATTTTGTCTCAACGGAGTACTTAATaaaaaaa 10141
| | ||||| | ||||||| |||||||| || ||| | || || || |||
Sbjct 31023 GCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTG 30966
Query 10142 TACTTTGTGCCATTATTTGAAGGATTGACAATGGCTGATGACCTAAATACTGTTATCaaa 10201
| ||||||||||| ||| |||||||| ||||| |||||||| |||||||| | ||
Sbjct 30965 CATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAG 30906
Query 10202 aaaaTGTTAGATGTCTCTAGTGGTCAGGGAACAAGGGAATATGAATACATCACAATTGCC 10261
|| ||||||||| || | |||||| || | | ||||||||| || ||||||||
Sbjct 30905 AAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCT 30846
Query 10262 AATAATATTGATTATGAAAAATGGAATAACTATCAAAGAATTGAATCCAATGGGCCGGTG 10321
||| ||||| |||||||||| ||||| || |||||||| |||| | || || ||
Sbjct 30845 AATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTT 30786
Query 10322 TTCACTGTGATGGGACGATTTTTAGGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTT 10381
||||| || ||||||| ||||||||| | ||||||||| | || |||| ||||| ||
Sbjct 30785 TTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTC 30726
Query 10382 TTCCAAAAGAGTTTGATCTATTACAACCAAAGACCAGACCTCATGATGGTGAGAGGACGG 10441
|||||| |||||| || ||||||||| | ||||| || || |||| || | || |
Sbjct 30725 TTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGAA--- 30669
Query 10442 GAATGTCT-GAACAGATTGGGAGT-----GAAAGTGTGTTGGGAAGGACAAAAGGGAGGA 10495
| || | ||| | | | | || || || ||| | || ||| ||||||
Sbjct 30668 GCTCGTTTAGAAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGA 30609
Query 10496 TTAGAAGGTTTGAGACAAAAGGGATGGAGCATATTAAATTATTTGATGATAGAGAGAGAA 10555
|||| || |||||||||| ||||| || || | |||| | | || | ||||||
Sbjct 30608 CTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGTTTATTA--TAAACATTAAAAGAGAA 30551
Query 10556 AGTAGAGTAAGAAACACAAGAGTTAAAATTCTTGCTCAAGGAGACAATCAGACAATCAGC 10615
||| ||| ||| || ||| ||| || | || |||||||| ||||| || |
Sbjct 30550 GGTAAAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGT 30491
Query 10616 ATGTGTTATAAA--ACAGAGAGCTGGCAAAATGAGGAA-GAGTTAGATAACCATATCAAA 10672
| |||||| |||| || | | | || || || ||||| | |||| ||
Sbjct 30490 ACTCAATATAAACTGCAGA-AGATACGATCA--AGCAATGAACTAGATGAATGTATCCAA 30434
Query 10673 AATATGGTCTCCAATAACAATCAAATAATGCAAGCAATCAT---AAACGGGACTGAAAAG 10729
| || | || || |||||| |||||||| || || ||| ||| || ||| |
Sbjct 30433 AGAATTATATCAAACAACAATAAAATAATG--AGTAA-CATAGAAAAAGGAACTAATCGA 30377
Query 10730 CTCGGATTGAGAATCAATTTGGATGAGACCATGACAAGT--GCTGATTATATAAATTATG 10787
||||||||| ||| ||| ||||| |||||| |||| || |||||| | |||||||
Sbjct 30376 CTCGGATTGTTAATTAATCAAGATGAAACCATG--AAGTCAGCGGATTATTTGAATTATG 30319
Query 10788 GGAAAGTTCCTATAATT-GAGGGAACAATAAAGGGACTGCCAACAAAAAGATGGTCTCGA 10846
|||| ||||| || || | ||||| | |||| || || | ||||||||||||| |||
Sbjct 30318 GGAAGGTTCCGATTTTTCGTGGGAA-AGTAAAAGGGATGGAATCAAAAAGATGGTC-CGA 30261
Query 10847 GT 10848
||
Sbjct 30260 GT 30259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47557584953769
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |