Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_002803.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq1802 206 2e-49 >seq1802 Length=132586 Score = 206 bits (228), Expect = 2e-49 Identities = 418/613 (68%), Gaps = 13/613 (2%) Strand=Plus/Minus Query 6114 CCAATCCCGAGCAAGAAGGTTTTAGAGACCATGATAAACAACCCTGCAACAGATTGGCCA 6173 || |||||| |||||||| ||||||| | || |||| || |||||||| ||| | Sbjct 31185 CCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAA 31126 Query 6174 ACATTCCTTAAAGCAGTAGATGAAGAGGGATTA--CCCAGAGATAATCTCATCATTGGAT 6231 || || | |||| || |||| | || ||| ||| || ||| ||| | || |||| Sbjct 31125 ACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGA-ATA-TCTTGTTATCGGAT 31068 Query 6232 TGAAAGGGAAAGAAAGAGAGCTTAAGATTGCGGGGAGATTCTTCTCTCTGATGTCATGGC 6291 | ||||| || || | |||| | || ||||| || |||| ||||| ||| Sbjct 31067 TACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGA 31008 Query 6292 AATTGAGGGAGTACTTTGTAATTACAGAGTATCTGATCAAGACACATTATGTTCCGCTCT 6351 |||| || || || || ||||| ||| ||| |||| || |||| ||| || | | Sbjct 31007 AATTAAGAGATTATTTCGTAATAACAA--TATTTGATTAAAGTGCATTTTGTGCCATTGT 30950 Query 6352 TCAAGGGATTAACGATGGCCGACGATCTAACCTCTGTGGTAAAGAAGATGTTAGATAACA 6411 | |||||| || ||||| || || || | |||| |||||||||||||||||| Sbjct 30949 TTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTT 30890 Query 6412 CTAATGGGCAAGGCTTGGACGACTACTCATCTATATGCATTGCGAACCACATTGATTATG 6471 | ||||| ||||| || || | || || |||| ||||| || || ||| |||||| Sbjct 30889 CGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATG 30830 Query 6472 AAAAATGGAACAATCATCAACGGAAAGAATCCAATGGGCCTGTATTTCGAGTCATGGGTC 6531 |||| ||||||||||||||| | | ||| | || ||||| || ||||||||| | Sbjct 30829 AAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGAC 30770 Query 6532 AATTCTTAGGATACCCTCGACTGTTTGAAAGGACACATGAATTCTTTGAGTCAAGTCTCA 6591 |||| ||||| || ||| || | | || ||||||||||| | || ||| | | Sbjct 30769 AATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAA 30710 Query 6592 TTTATTATAACGGGAGGCCGGACCTGATGGATGTGAGAGGGGATTCTTTAGTGAATACAA 6651 ||||||| ||| || || || || ||| || | || | | |||| ||| |||| Sbjct 30709 TTTATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTTTA--GAAAACAA 30652 Query 6652 ----CAGAT-AAGATAGTCTGCTGGGAAGGGCAAGCAGGCGGATTAGAAGGGCTTTCGCA 6706 | || |||| || |||||| | || |||||||| ||| |||| ||||| || Sbjct 30651 AGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACA 30592 Query 6707 GAAAGGATGGAGT 6719 |||||||| ||| Sbjct 30591 AAAAGGATGAAGT 30579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35142713272212