Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_007020.1 Length=11440 Score E Sequences producing significant alignments: (Bits) Value seq1802 147 2e-31 >seq1802 Length=132586 Score = 147 bits (162), Expect = 2e-31 Identities = 331/492 (67%), Gaps = 13/492 (3%) Strand=Plus/Minus Query 6601 AAAGAGAGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATGAGTTGGGAGCTCAGA 6660 || ||| || || | || ||| ||||| |||||||| || ||| ||| | | ||| Sbjct 31059 AAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGA 31000 Query 6661 GAGTACTTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATTCCTCTTTTTAAGGGG 6720 || || ||||| | || | ||| ||||||| | ||||| | || | ||| ||| Sbjct 30999 GATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGA 30942 Query 6721 TTGACGATGGCCGATGATATGACCGGAGTCATCAAGAAACTGCTAGAGTGCTCCAACGGC 6780 ||||| ||||| ||||| | | || | ||||| || |||| || || || Sbjct 30941 TTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGT 30882 Query 6781 CACGG---AGAAACAGATTACTCAAATATAACCATATCAAATCACTTAGATTACTCGAAA 6837 || || ||| | || | | ||||||| || | ||||| | |||| || Sbjct 30881 CAAGGGTTAGATGGATATGAAT---ATATAACAATTGCTAATCATATTAATTATGAAAAG 30825 Query 6838 TGGAACAATCATCAAAGATATGAATCCAACAAATATGTATTCCAAGTGATGGGATCCTTT 6897 |||||||||||||||||| ||||| | ||||| ||| ||| ||| |||||| ||| Sbjct 30824 TGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTT 30765 Query 6898 TTAGGATATCCAAATCTTATCTCTCGCACCCACGAATTTTTCCAAAAATCCTTGATATAT 6957 ||||| ||||| ||| | |||||||| ||||| ||||| |||||| || || ||| Sbjct 30764 TTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTAT 30705 Query 6958 TTCATAAATAGGCCAGATTTAATGGTCGTAAAAGGGAACACATT--GGAGCCTAAG--GG 7013 | || ||||| || ||| ||||| || | | | | | | || | | | ||| Sbjct 30704 TACAACAATAGACCTGATCTAATGACAGTTATA-GAAGCTCGTTTAGAAAACAAAGACCC 30646 Query 7014 TCAGATGAGGGTATGCTGGAACGGGCAAGCCGGGGGCCTCGAAGGTCTTCGTCAAAAAGG 7073 | || |||||| |||||||| || ||||| || || || || || || | |||||||| Sbjct 30645 TATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGG 30586 Query 7074 GTGGAGTATTGT 7085 || ||||| || Sbjct 30585 ATGAAGTATCGT 30574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36489802618256