Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_007020.1
Length=11440
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 147 2e-31
>seq1802
Length=132586
Score = 147 bits (162), Expect = 2e-31
Identities = 331/492 (67%), Gaps = 13/492 (3%)
Strand=Plus/Minus
Query 6601 AAAGAGAGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATGAGTTGGGAGCTCAGA 6660
|| ||| || || | || ||| ||||| |||||||| || ||| ||| | | |||
Sbjct 31059 AAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGA 31000
Query 6661 GAGTACTTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATTCCTCTTTTTAAGGGG 6720
|| || ||||| | || | ||| ||||||| | ||||| | || | ||| |||
Sbjct 30999 GATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGA 30942
Query 6721 TTGACGATGGCCGATGATATGACCGGAGTCATCAAGAAACTGCTAGAGTGCTCCAACGGC 6780
||||| ||||| ||||| | | || | ||||| || |||| || || ||
Sbjct 30941 TTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGT 30882
Query 6781 CACGG---AGAAACAGATTACTCAAATATAACCATATCAAATCACTTAGATTACTCGAAA 6837
|| || ||| | || | | ||||||| || | ||||| | |||| ||
Sbjct 30881 CAAGGGTTAGATGGATATGAAT---ATATAACAATTGCTAATCATATTAATTATGAAAAG 30825
Query 6838 TGGAACAATCATCAAAGATATGAATCCAACAAATATGTATTCCAAGTGATGGGATCCTTT 6897
|||||||||||||||||| ||||| | ||||| ||| ||| ||| |||||| |||
Sbjct 30824 TGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTT 30765
Query 6898 TTAGGATATCCAAATCTTATCTCTCGCACCCACGAATTTTTCCAAAAATCCTTGATATAT 6957
||||| ||||| ||| | |||||||| ||||| ||||| |||||| || || |||
Sbjct 30764 TTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTAT 30705
Query 6958 TTCATAAATAGGCCAGATTTAATGGTCGTAAAAGGGAACACATT--GGAGCCTAAG--GG 7013
| || ||||| || ||| ||||| || | | | | | | || | | | |||
Sbjct 30704 TACAACAATAGACCTGATCTAATGACAGTTATA-GAAGCTCGTTTAGAAAACAAAGACCC 30646
Query 7014 TCAGATGAGGGTATGCTGGAACGGGCAAGCCGGGGGCCTCGAAGGTCTTCGTCAAAAAGG 7073
| || |||||| |||||||| || ||||| || || || || || || | ||||||||
Sbjct 30645 TATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGG 30586
Query 7074 GTGGAGTATTGT 7085
|| ||||| ||
Sbjct 30585 ATGAAGTATCGT 30574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36489802618256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |