Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_013955.1 Length=15764 Score E Sequences producing significant alignments: (Bits) Value seq1802 154 1e-33 >seq1802 Length=132586 Score = 154 bits (170), Expect = 1e-33 Identities = 311/460 (68%), Gaps = 15/460 (3%) Strand=Plus/Minus Query 11032 GGAAGGtttttttCTTTAATGACATGGGAACTCAGAGAATATTTCGTATGTACAGAGTAT 11091 || || |||||| || | ||| | ||| || | ||||| ||||||||| ||| ||| Sbjct 31035 GGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAACAA--TAT 30978 Query 11092 ATGATCAAACAGTTCTTCATTCCCCTGTTTCAAGGCCTGACTATGGCTGATGATATGCAA 11151 |||| ||| | || | || ||||| || |||||||||| ||||| | | Sbjct 30977 TTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAAT 30918 Query 11152 GAGGTCCTTAAAAAATTACTAAGCAGTTCTAGTGGTCAAGGTTTAGACAATTACAACTTG 11211 || | || || | || | ||| | ||||||||| ||||| || | | Sbjct 30917 ACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATAT 30858 Query 11212 ATCTCAATTGCCAATCATTTTGATTATGAAAAATGGAATAATCATCAAAGATATGCTTCA 11271 || ||||||| |||||| || |||||||||| ||||| |||||||||||| ||| | Sbjct 30857 ATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCG 30798 Query 11272 AATTGCCATGTGTTTAAAGTCATGGGACAATGTTTTGGTTTACCCAATCTGTTCCTGCGT 11331 || | ||| || | |||||||||||||| ||| || | || ||| || || || Sbjct 30797 AACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGA 30738 Query 11332 ACACATGAATTCTTTGAGAAAAGCTTGATCTATTATGCCAATAGACCAGATTTGATGATG 11391 || ||||||||||| | || || || ||||| ||||||||| ||| | |||| Sbjct 30737 ACCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACA 30678 Query 11392 GTTCAAGGAGATTCTCTCATTAATAGAAC--AGAGCATAT------GGTATGCTGGGAAG 11443 ||| || || ||| || | | ||| ||| | ||| ||| |||||| | | Sbjct 30677 GTTATAGAAG-----CTCGTTTAGAAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATG 30623 Query 11444 GTCAAAAAGGAGGATTAGAAGGCCTTAGACAAAAGGGATG 11483 ||||| ||||||| |||| || || |||||||| ||||| Sbjct 30622 GTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATG 30583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50322151555401