Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_017714.1
Length=15867
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 275 6e-70
>seq1802
Length=132586
Score = 275 bits (304), Expect = 6e-70
Identities = 695/1043 (67%), Gaps = 29/1043 (3%)
Strand=Plus/Minus
Query 10762 GATTTTGGAGACAACTGGCATAGACTGCCATTGATTAAATGTTTTGATATTCCTGATATG 10821
|| ||||| || | ||||||| || || |||| || |||||||| || || ||| ||
Sbjct 31332 GACTTTGGGGATCAATGGCATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTG 31273
Query 10822 ATTGACCCCAGTATAATATACAGTGATAAATCTCATTCTATTAATAGATCAGAAGTAATG 10881
|| || || ||| |||| || ||||||| ||||| || | | ||||| | | |
Sbjct 31272 ATCGATCCTAGTTTAATCTATGCTGATAAAAGCCATTCAATCACTTAATCAGCAATTCTA 31213
Query 10882 AAACATATTCGAGAAAAACCAAACAAACCTATACCAACAA-GAAGAGTACTGAAAACATT 10940
| ||| | || || | || || | || || || ||| |||| ||||| | || ||
Sbjct 31212 GAGCATGTAAGAAAATATCCGAATATTCCGATCCCGTCAAAGAAG-GTACTAGAGACTTT 31154
Query 10941 ATTAGAGAAACCTGCGACAATTTGGCCTGAATTTCTTAAAAAAGTCAATGATTTTGGATT 11000
| | | || || ||| ||| ||| | ||| | ||||||||| ||| ||
Sbjct 31153 TATCAACAGTCCCGCAACAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTT 31094
Query 11001 GGATTGGGAGAGTTTGGTAATTGGGTTAAAAGCAAAGGAAAGGGAA-TTGAAGGATGCAG 11059
|| ||| | | || || || ||| | ||||| | || || || || ||
Sbjct 31093 AGACCCGGAATATCTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAAT-AG 31035
Query 11060 GTAGATTCTTTTCATTGATGAGTTGGGAGTTAAGAGAGTATTTTGTATTCACAGAGTATT 11119
||||||| ||| | | ||| ||| | |||||||| ||||| ||| | ||| ||||
Sbjct 31034 GTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAACAA--TATT 30977
Query 11120 TGATTAAAGAACATTTTGTGCCATTATTCAAAGGATTAACTATGGCAGATGATCTACAAA 11179
||||||||| |||||||||||||| || ||||| |||||||||||||| || | |
Sbjct 30976 TGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATA 30917
Query 11180 CTGTAATTAAAAAGATGATTGATGTATCAGCAGGACAAGGTACTGAAACCTATGAAAACA 11239
||||| | || |||||| | ||| || || ||||| || |||||| | |
Sbjct 30916 CTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATA 30857
Query 11240 TAACAATAGCGAATAATATTGACTATGAGAAGTGGAATAATTATCAAAGATATGATTCAA 11299
||||||| || ||| ||||| | ||||| |||||||| ||| |||||||| |||| | |
Sbjct 30856 TAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGA 30797
Query 11300 ATAGTGCAATTTTCACTGTCATGGGACAATTTTTAGGGTATCCAAAGTTAATAGCAAGAA 11359
| | | | ||||||| |||||||||||||||||||||||||| || || || | |||
Sbjct 30796 ACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAA 30737
Query 11360 CTCATGAGTTTTTTGAGAAAAGCCTGATCTACTATAATCAGAGACCAGATCTGATGAGAG 11419
| ||||| || || | || | || || || || | ||||| ||||| |||| ||
Sbjct 30736 CCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACAG 30677
Query 11420 TTGTTGGAAATGAGGTAGTGAGCATGGAC---AACAAAAAAGTTGCTTGGGAGGGACAAA 11476
|| | | | | ||| | || ||| | || | ||| ||| | || |||
Sbjct 30676 TTATAGAAGCTCGTTTAGAAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAG 30617
Query 11477 AGGGGGGATTAGAAGGTCTGAGACAAAAAGGGTGGAGTGTAGTAAATCTTCTAATGATTG 11536
|| ||| |||| || |||||||||||||| || ||| | || | || ||| |||
Sbjct 30616 CAGGAGGACTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGT--TTATTATAAACATTA 30559
Query 11537 AGAGAGAAGTAAAAATACGAAATAC----ATTGGTAAAAGTGTTAGCGCAGGGAGACAAT 11592
| ||||||| ||| | |||||| || ||| | || ||||| ||||| |||
Sbjct 30558 AAAGAGAAGGTAAAGTTGAAAATACGAGACTTAGTA----TCTTGGCGCAAGGAGATAAT 30503
Query 11593 CAAACAATCACTACTCACTATAAAACTGAAACTTTTCATAATGATGCA--GAATTACAAG 11650
||| || |||||| ||| |||||| | | | || | ||| ||| || | |
Sbjct 30502 CAAGTTGTCTGTACTCAATAT-AAACTGCAGAAGAT-ACGATCAAGCAATGAACTAGATG 30445
Query 11651 AGCATAT---AAGACATATTGTAAATAATAATAATGCAATTATGGAAAGCATAGTTATCG 11707
| ||| |||| ||| ||| || ||||| ||| ||| | ||||| | |
Sbjct 30444 AATGTATCCAAAGAATTATATCAAACAACAATAA---AATAATGAGTAACATAGAAAAAG 30388
Query 11708 GAACAAGGAGACTAGGACTAAAAATCAATGAGGATGAGACTATGCAATCACCAGACTATA 11767
|||| | |||| ||| | ||| ||| | ||||| || ||| | ||| | || |||
Sbjct 30387 GAACTAATCGACTCGGATTGTTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATT 30328
Query 11768 TAAATTATGGGAAGGTTCCAATT 11790
| ||||||||||||||||| |||
Sbjct 30327 TGAATTATGGGAAGGTTCCGATT 30305
Score = 78.8 bits (86), Expect = 9e-11
Identities = 130/185 (70%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 12897 TAAAAAAGGTCCTTACAATCCTTATTTAGGGTCAAAGACTAAGGAGAGCACGAGTATATT 12956
||| ||||| |||||||| | |||||||||||||| || || || || | | |
Sbjct 29202 TAAGAAAGGACCTTACAAGGCATATTTAGGGTCAAAAACATGTGAAAGTACTTCTCTTCT 29143
Query 12957 GCAACCTTGGGAAAAAGAGTCAAACATACCTGTTATAAAACGTGCAAGTGATTTGAGGAA 13016
|||| |||||| | ||| |||| ||||| | || | | | ||| |||||| || ||
Sbjct 29142 AAAACCGTGGGAATATGAGACAAAAATACCATTAATTAGAAGAGCATCTGATTTAAGAAA 29083
Query 13017 AGCTATTTCA-TGGTTTATTAAAGAGGATTCAAACTTAGCAAAATCTATTTTCAAAAATT 13075
||| || || |||||| | || || |||||||| | ||| || || |||| ||||
Sbjct 29082 GGCT-TTCCATTGGTTTGTAGAACCTGAGTCAAACTTGGGAAAGTCAATAATCAATAATT 29024
Query 13076 TGGAA 13080
| |||
Sbjct 29023 TAGAA 29019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 50651723731290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |