Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq1802 282 3e-72 >seq1802 Length=132586 Score = 282 bits (312), Expect = 3e-72 Identities = 744/1124 (66%), Gaps = 24/1124 (2%) Strand=Plus/Minus Query 6040 GATCCAAGATTTTGGAGATCACTGGCATGAGCTCCCATTAATTCAATGCTTCGACATACC 6099 |||| ||| ||||| ||||| |||||| || || || | | || || || || || Sbjct 31339 GATCAGAGACTTTGGGGATCAATGGCATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCC 31280 Query 6100 TGATCTGATTGATCCATCCATTATCTACTCAGACAAGAGCCATTCCATGAATCGATCAGA 6159 ||| |||| ||||| | ||||| | || || |||||||| || | | ||||| Sbjct 31279 CGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGCCATTCAATCACTTAATCAGC 31220 Query 6160 GGTGTTAAATCATGTAAGAACCAAGCCTCATACACCGATTCCAAGCAAGAAAGTTTTAGA 6219 | || | |||||||||| | || ||| ||||| || ||||| || |||| Sbjct 31219 AATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGATCCCGTCAAAGAAGGTACTAGA 31160 Query 6220 GAGTATGATCGACAAACCAGCGACAAATTGGCTTGAGTTTCTTGAAGAGATCGACAAAAA 6279 || | | ||| ||| || || ||| | ||| ||| | ||||| || | | | Sbjct 31159 GACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCA 31100 Query 6280 TGGATTATCTGATGAGGATTTGGTGATCGGATTAAAAGGAAAAGAAAGAGAACTGAAGAT 6339 ||| ||| || || | || ||||||||| || || || || || | || | Sbjct 31099 TGGTTTAGACCCGGAATATCTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAG 31040 Query 6340 TGCAGGTAGATTTTTCTCATTGATGTCTTGGAAGCTTAGGGAATACTTTGTTGTCACAGA 6399 |||||||||||| | | ||||| ||||| | || || || || || | ||| Sbjct 31039 AATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAACAA- 30981 Query 6400 GTATTTGATCAAGACTCACTTTGTGCCATTGTTCCATGGGCTGACCATGGCTGATGATAT 6459 |||||||| || || |||||||||||||| || |||| ||||| ||||| | Sbjct 30980 -TATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCT 30922 Query 6460 GACAGCAGTGATCAAAAAGATGCTGGAAAGCTCGTCTGGTCAAGGGCTAACAAACTACGA 6519 | | || | || |||||| | || | ||| |||||||||| || || || Sbjct 30921 TAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGA 30862 Query 6520 CAGCGTTTGTATTGCAAATCATATTGACTATGAAAAATGGAATAATCATCAACGAAA--- 6576 | ||||| ||||||||| | |||||||| ||||| ||||||||| || | Sbjct 30861 ATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGA 30802 Query 6577 ATTGTCCAATGGACCTGTGTTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATTTGAT 6636 | | |||| ||||| || | ||||||||||||||| || || ||||| |||||||| Sbjct 30801 AGCGAACAAT---CCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGAT 30745 Query 6637 ATACCGGACACATGAGTTTTTTGAGAAAAGTTTAATTTACTATAATGAAAGACCGGATCT 6696 | || || ||||| || || | ||||||||||| || || | ||||| ||||| Sbjct 30744 CTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCT 30685 Query 6697 CATGAAAGTCAGAAATGGGATCTTAGAAA--ATAGCACACAT-CAGAGGGTTTGCTGGAA 6753 |||| ||| | | | | ||||||| | || | || |||||||||||||||| Sbjct 30684 AATGACAGTTATAGAAGCTCGTTTAGAAAACAAAGACCCTATGAAGAGGGTTTGCTGGAA 30625 Query 6754 TGGACAGGCAGGTGGTTTAGAAGGTTTGAGACAGAAAGGATGGAGTATTCTTAATTTGCT 6813 ||| || ||||| || |||| || ||||||| |||||||| ||||| || ||| | Sbjct 30624 TGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGTTTATT--AT 30567 Query 6814 GGTCATACAGAGAGAAGCGAAAATCCGGAATACCGCAGTTAAAGTGCTAGCACAAGGCGA 6873 ||| | ||||||| ||| | ||||| | ||| | | || ||||| || Sbjct 30566 AAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGA 30507 Query 6874 CAATCAAGTCATATGTACACAGTACAA----GACCAAACAGTATCGAAACGAT-ATCGAG 6928 |||||||| | ||||| || || || | | | | ||| || | || | | || Sbjct 30506 TAATCAAGTTGTCTGTACTCAATATAAACTGCAGAAGATACGATC-AAGCAATGAACTAG 30448 Query 6929 TTGAGACAAGCCTTAAACCAAATGGCAGCAAACAATGATGTCATCATGAAGGCCATAGAG 6988 ||| | || ||| ||| | ||||||| || || |||| |||||| Sbjct 30447 ATGAATGTATCC--AAA--GAATTATATCAAACAACAATAAAATAATGAGTAACATAGAA 30392 Query 6989 TCAGGAACCAATAAGTTGGGTTTGTTGATCAATCAGGATGAGACGATGCAATCTGCTGAT 7048 |||||| ||| | || ||||| || ||||| ||||| || ||| | || || ||| Sbjct 30391 AAAGGAACTAATCGACTCGGATTGTTAATTAATCAAGATGAAACCATGAAGTCAGCGGAT 30332 Query 7049 TATCTGAACTATGGGAAGGTACCTATCTTTAGAGGAGTAATCAGAGGGCTGGAAACAAAG 7108 ||| |||| ||||||||||| || || ||| | || | | | |||| ||||| |||| Sbjct 30331 TATTTGAATTATGGGAAGGTTCCGATTTTTCGTGGGAAAGTAAAAGGGATGGAATCAAAA 30272 Query 7109 CGATGGTCCCGAGTCACTTGTGTGACAAATGACCAATTACCAAC 7152 |||||| |||||| | ||| || | || || |||||||| || Sbjct 30271 AGATGGT-CCGAGTAGCATGTATGTCTAACGATCAATTACCTAC 30229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35465886725776