Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_020806.1
Length=11088
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 170 1e-38
>seq1802
Length=132586
Score = 170 bits (188), Expect = 1e-38
Identities = 865/1359 (64%), Gaps = 46/1359 (3%)
Strand=Plus/Minus
Query 5746 TACGGATCTTTCCGTCATTGGGGCCATCCCTTCATTGATTATTTTGCGGGGTTGACAAAA 5805
|||||||| || | |||||||| ||||| || |||| ||| | || | | |||
Sbjct 31593 TACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTATCTACAAGGACTCAAAAAG 31534
Query 5806 TTGAATTCCCAAGTCACTATGGGGAAACAGATTGAT-GATGAGTATGTGGCCTGCCTG-G 5863
|| || ||| ||| | |||| ||||||| || || |||| | | || | |
Sbjct 31533 TTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAGA-TATGCG-CAGGCATTAG 31476
Query 5864 CAAGTGACTTGGCAAGAATTGTGCTCACTAAGGAATTCAATGAGAAAAAGAGATGG--AG 5921
|||||||||| ||| |||||| | | || ||||| | | || |||| ||| ||
Sbjct 31475 CAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAAAAAGAAGATTTGGTCAG 31416
Query 5922 TGTGAACTACAATTTAGTTCCTCAGGATCATCCTTTTCATGAACACATCCGAGACAATAC 5981
| ||| |||| || | | | ||||| ||| | |||| || | |||||
Sbjct 31415 TTGAAAC--CAATCTATTGCGAAAAGATCACCCTCTATATGACTCAATTACTCAAAATAC 31358
Query 5982 ATGGCCTACTCCAGCCGTGATACAAGATTTTGGGGACAAATGGCATGAGTTACCACTCAC 6041
||||||||||||| ||| ||| |||||||| |||||||| | || | |
Sbjct 31357 ATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATACTCTTCCTTTGAA 31298
Query 6042 TCAATGCTTTGAAATTCCTGATTTGATAGACCCTTCTATCATCTACTCGGATAAAAGTCA 6101
| || ||||| || || ||| |||| || ||| | | ||||| | |||||||| ||
Sbjct 31297 AAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGCCA 31238
Query 6102 CTCCATGAATCGACAAGATGTACTAAATCATGTAAAGAGAAAACCAGATCAACCTATACC 6161
|| || | | | || | ||| | ||||||| | | | || || || || ||
Sbjct 31237 TTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGATCCC 31178
Query 6162 TAGCAGGAAAGTTTTGCAAACTATGATAGATACACCTGCCACTAACTGGTTGGAGTTTTT 6221
| ||| || | | ||| | || | | || || || | ||| |||||
Sbjct 31177 GTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTTTTT 31118
Query 6222 GGAAGAAATTGACAAAAATGGGTTGAGTGATGATGACCTGGTGATTGGGCTAAAAGGGAA 6281
| |||| | | | |||| || || | || || || || || |||||
Sbjct 31117 GAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGGGGGAA 31058
Query 6282 GGAAAGAGAATTGAAGATAGCCGGGAGATTTTTCTCACTAATGTCGTGGAAGCTGAGAGA 6341
||| || || | || | | || |||||||| | || ||||| ||||| | |||||
Sbjct 31057 GGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGA 30998
Query 6342 ATATTTTGTGATCACGGAATATCTAATTAAGACACACTTTGTACCACTTTTCCACGGCTT 6401
||||| || || || ||||| | ||||| || ||||| ||| | || || ||
Sbjct 30997 TTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATT 30940
Query 6402 GACAATGGCAGATGACATGACGGCTGTAATAAAGAAAATGTTGGAAAGTTCAAGTGGACA 6461
||| |||||||||||| | | ||||| ||||||| ||||| || | ||| | ||| ||
Sbjct 30939 GACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCA 30880
Query 6462 GGGTCTAAAAGATTATTCGGCAGTATGCATTGCAAACCACATTGACTATGAGAAATGGAA 6521
|| || | | ||| || ||||| || || ||| | ||||| || |||||
Sbjct 30879 AGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGAA 30820
Query 6522 CAACCATC----AGAGGAAACGGTCAAATGAACCAATTTTTAAAGTCATGGGTCAATTCT 6577
||| |||| ||| ||| || || | || |||| | ||||||||| ||||| |
Sbjct 30819 CAATCATCAAAGAGATGAAGCG----AACAATCCTGTTTTCACAGTCATGGGACAATTTT 30764
Query 6578 TGGGGTTTCCCAACCTTATATCGAGGACTCATGAATTCTTTGAGAAAAGTCTCATCTATT 6637
| |||| ||| || | || || | || ||||||||||| | ||| | || ||||
Sbjct 30763 TAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATT 30704
Query 6638 ATAATGGAAGGCCTGATTTGATGAAGGTGCAAGATGGAAGACTTGT---GAACACAACGA 6694
| || || |||||| | |||| || || |||| || || ||| |||| ||
Sbjct 30703 ACAACAATAGACCTGATCTAATGACAGT----TATAGAAG-CTCGTTTAGAAAACAAAGA 30649
Query 6695 AGCAAT-----TGGTTTGTTGGGAAGGACAGGCAGGCGGATTAGAGGGGTTAAGACAGAA 6749
| || |||||| ||| | || || ||||| ||| |||||||| | ||||| ||
Sbjct 30648 CCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAA 30589
Query 6750 GGGATGGAGCATCTTAAACTTATTGGTTATTCAAAGGGAATCCAAGATTCGGAACACAGC 6809
||||| || ||| | | ||| | ||| |||| ||| || || || ||
Sbjct 30588 AGGATGAAGTATCGTTTA-TTA-TAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAG 30531
Query 6810 AGTTAAAGTCCTTGCACAAGGTGATAATCAAGTAATATGCACACAGTACA------AGAC 6863
| ||| || | || ||||| ||||||||||| | || || || || | |||
Sbjct 30530 ACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAA 30471
Query 6864 AAAACAACACAGAAATGAAACAGAATTGCGATCTGCTCTTACTCAAATGAAATTGAATAA 6923
| || | || |||||| ||| || || | || | ||| | || || ||
Sbjct 30470 GATACGATCAAGCAATGAACTAGA--TG-AATGT-ATCCAA--AGAATTATATCAAACAA 30417
Query 6924 TGATGCAGTTATGAAAGCCATTGAATCTGGAACAAACAAACTAGGTTTGTTGATCAACCA 6983
|| | | |||| ||| ||| ||||| || ||| || ||||| || || ||
Sbjct 30416 CAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTAATCA 30357
Query 6984 AGATGAAACAATGCAATCAGCTGACTACCTGAATTACGGTAAAGTTCCCATATTTAGAGG 7043
||||||||| ||| | ||||| || || ||||||| || || ||||| || ||| | ||
Sbjct 30356 AGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTCGTGG 30297
Query 7044 AGTGATACGAGGTTTAGAAACAAAAAGGTGGTCACGAGT 7082
|| ||| | ||| ||||||| ||||| |||||
Sbjct 30296 GAAAGTAAAAGGGATGGAATCAAAAAGATGGTC-CGAGT 30259
Score = 100 bits (110), Expect = 2e-17
Identities = 247/367 (67%), Gaps = 6/367 (2%)
Strand=Plus/Minus
Query 8146 GCATACCTAGGGTCAAAAACATCTGAGTCTACTTCTATTCTTCAACCATGGGAGAAAGAG 8205
||||| ||||||||||||||| ||| ||||||| |||| |||| ||||| | |||
Sbjct 29183 GCATATTTAGGGTCAAAAACATGTGAAAGTACTTCTCTTCTAAAACCGTGGGAATATGAG 29124
Query 8206 AGCAAAATCCCGATCATCAAAAGAGCTACTCGATTAAGAGATGCCATTCATTGGTTTGTG 8265
| ||||| || | || | |||||| || |||||| | || | |||||||||||
Sbjct 29123 ACAAAAATACCATTAATTAGAAGAGCATCTGATTTAAGAAAGGCTTTCCATTGGTTTGTA 29064
Query 8266 GAGCCAAGCTCCAACTTGGCAAAGAGCATCTTGCAAAACATCACAGCACTAACAGGAGAA 8325
|| || || ||||||| |||| || | | || | ||| ||||| ||
Sbjct 29063 GAACCTGAGTCAAACTTGGGAAAGTCAATAATCAATAATTTAGAAGCCCTAACTGGTATC 29004
Query 8326 GAGTGGGGATCATCACTA-GAAGGATTTAAGAGAACGGGGTCTGCTCTCCATAGATTTAC 8384
| |||| | | || | |||| || | ||| | || |||||||| ||| | ||||
Sbjct 29003 AAATGGGAAGAAGCAGGATTAAGGGCTTTA-AGATCTGGCTCTGCTCTACATCGTTTTAG 28945
Query 8385 CACATCACGAATGAGCCATGGAGGCTTTTGTGCCCAAAGCCCGGCTGCATTG-ACAAGGA 8443
| || ||| |||||| ||||| | | ||||| || | | || || | ||| |||
Sbjct 28944 CTGCTCTCGACAGAGCCAAGGAGGTTATATTGCCC-AATCACCTCTCTATGGAACATGGA 28886
Query 8444 TGATGGCAACCACAGATACAATGAGCG-ACTATGCAAAAGACAATTATGATTTTATGTTC 8502
|||| |||| || ||||| ||| | | ||| | ||||| || | ||| || | ||
Sbjct 28885 TGATTACAACAACTGATACTATGGGTGAACTGGGTGAAAGA-AACTTTGACTTCCTATTT 28827
Query 8503 CAGGCTT 8509
|||||||
Sbjct 28826 CAGGCTT 28820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35363495136528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |