Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_020806.1 Length=11088 Score E Sequences producing significant alignments: (Bits) Value seq1802 170 1e-38 >seq1802 Length=132586 Score = 170 bits (188), Expect = 1e-38 Identities = 865/1359 (64%), Gaps = 46/1359 (3%) Strand=Plus/Minus Query 5746 TACGGATCTTTCCGTCATTGGGGCCATCCCTTCATTGATTATTTTGCGGGGTTGACAAAA 5805 |||||||| || | |||||||| ||||| || |||| ||| | || | | ||| Sbjct 31593 TACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTATCTACAAGGACTCAAAAAG 31534 Query 5806 TTGAATTCCCAAGTCACTATGGGGAAACAGATTGAT-GATGAGTATGTGGCCTGCCTG-G 5863 || || ||| ||| | |||| ||||||| || || |||| | | || | | Sbjct 31533 TTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAGA-TATGCG-CAGGCATTAG 31476 Query 5864 CAAGTGACTTGGCAAGAATTGTGCTCACTAAGGAATTCAATGAGAAAAAGAGATGG--AG 5921 |||||||||| ||| |||||| | | || ||||| | | || |||| ||| || Sbjct 31475 CAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAAAAAGAAGATTTGGTCAG 31416 Query 5922 TGTGAACTACAATTTAGTTCCTCAGGATCATCCTTTTCATGAACACATCCGAGACAATAC 5981 | ||| |||| || | | | ||||| ||| | |||| || | ||||| Sbjct 31415 TTGAAAC--CAATCTATTGCGAAAAGATCACCCTCTATATGACTCAATTACTCAAAATAC 31358 Query 5982 ATGGCCTACTCCAGCCGTGATACAAGATTTTGGGGACAAATGGCATGAGTTACCACTCAC 6041 ||||||||||||| ||| ||| |||||||| |||||||| | || | | Sbjct 31357 ATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATACTCTTCCTTTGAA 31298 Query 6042 TCAATGCTTTGAAATTCCTGATTTGATAGACCCTTCTATCATCTACTCGGATAAAAGTCA 6101 | || ||||| || || ||| |||| || ||| | | ||||| | |||||||| || Sbjct 31297 AAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGCCA 31238 Query 6102 CTCCATGAATCGACAAGATGTACTAAATCATGTAAAGAGAAAACCAGATCAACCTATACC 6161 || || | | | || | ||| | ||||||| | | | || || || || || Sbjct 31237 TTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGATCCC 31178 Query 6162 TAGCAGGAAAGTTTTGCAAACTATGATAGATACACCTGCCACTAACTGGTTGGAGTTTTT 6221 | ||| || | | ||| | || | | || || || | ||| ||||| Sbjct 31177 GTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTTTTT 31118 Query 6222 GGAAGAAATTGACAAAAATGGGTTGAGTGATGATGACCTGGTGATTGGGCTAAAAGGGAA 6281 | |||| | | | |||| || || | || || || || || ||||| Sbjct 31117 GAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGGGGGAA 31058 Query 6282 GGAAAGAGAATTGAAGATAGCCGGGAGATTTTTCTCACTAATGTCGTGGAAGCTGAGAGA 6341 ||| || || | || | | || |||||||| | || ||||| ||||| | ||||| Sbjct 31057 GGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGA 30998 Query 6342 ATATTTTGTGATCACGGAATATCTAATTAAGACACACTTTGTACCACTTTTCCACGGCTT 6401 ||||| || || || ||||| | ||||| || ||||| ||| | || || || Sbjct 30997 TTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATT 30940 Query 6402 GACAATGGCAGATGACATGACGGCTGTAATAAAGAAAATGTTGGAAAGTTCAAGTGGACA 6461 ||| |||||||||||| | | ||||| ||||||| ||||| || | ||| | ||| || Sbjct 30939 GACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCA 30880 Query 6462 GGGTCTAAAAGATTATTCGGCAGTATGCATTGCAAACCACATTGACTATGAGAAATGGAA 6521 || || | | ||| || ||||| || || ||| | ||||| || ||||| Sbjct 30879 AGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGAA 30820 Query 6522 CAACCATC----AGAGGAAACGGTCAAATGAACCAATTTTTAAAGTCATGGGTCAATTCT 6577 ||| |||| ||| ||| || || | || |||| | ||||||||| ||||| | Sbjct 30819 CAATCATCAAAGAGATGAAGCG----AACAATCCTGTTTTCACAGTCATGGGACAATTTT 30764 Query 6578 TGGGGTTTCCCAACCTTATATCGAGGACTCATGAATTCTTTGAGAAAAGTCTCATCTATT 6637 | |||| ||| || | || || | || ||||||||||| | ||| | || |||| Sbjct 30763 TAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATT 30704 Query 6638 ATAATGGAAGGCCTGATTTGATGAAGGTGCAAGATGGAAGACTTGT---GAACACAACGA 6694 | || || |||||| | |||| || || |||| || || ||| |||| || Sbjct 30703 ACAACAATAGACCTGATCTAATGACAGT----TATAGAAG-CTCGTTTAGAAAACAAAGA 30649 Query 6695 AGCAAT-----TGGTTTGTTGGGAAGGACAGGCAGGCGGATTAGAGGGGTTAAGACAGAA 6749 | || |||||| ||| | || || ||||| ||| |||||||| | ||||| || Sbjct 30648 CCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAA 30589 Query 6750 GGGATGGAGCATCTTAAACTTATTGGTTATTCAAAGGGAATCCAAGATTCGGAACACAGC 6809 ||||| || ||| | | ||| | ||| |||| ||| || || || || Sbjct 30588 AGGATGAAGTATCGTTTA-TTA-TAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAG 30531 Query 6810 AGTTAAAGTCCTTGCACAAGGTGATAATCAAGTAATATGCACACAGTACA------AGAC 6863 | ||| || | || ||||| ||||||||||| | || || || || | ||| Sbjct 30530 ACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAA 30471 Query 6864 AAAACAACACAGAAATGAAACAGAATTGCGATCTGCTCTTACTCAAATGAAATTGAATAA 6923 | || | || |||||| ||| || || | || | ||| | || || || Sbjct 30470 GATACGATCAAGCAATGAACTAGA--TG-AATGT-ATCCAA--AGAATTATATCAAACAA 30417 Query 6924 TGATGCAGTTATGAAAGCCATTGAATCTGGAACAAACAAACTAGGTTTGTTGATCAACCA 6983 || | | |||| ||| ||| ||||| || ||| || ||||| || || || Sbjct 30416 CAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTAATCA 30357 Query 6984 AGATGAAACAATGCAATCAGCTGACTACCTGAATTACGGTAAAGTTCCCATATTTAGAGG 7043 ||||||||| ||| | ||||| || || ||||||| || || ||||| || ||| | || Sbjct 30356 AGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTCGTGG 30297 Query 7044 AGTGATACGAGGTTTAGAAACAAAAAGGTGGTCACGAGT 7082 || ||| | ||| ||||||| ||||| ||||| Sbjct 30296 GAAAGTAAAAGGGATGGAATCAAAAAGATGGTC-CGAGT 30259 Score = 100 bits (110), Expect = 2e-17 Identities = 247/367 (67%), Gaps = 6/367 (2%) Strand=Plus/Minus Query 8146 GCATACCTAGGGTCAAAAACATCTGAGTCTACTTCTATTCTTCAACCATGGGAGAAAGAG 8205 ||||| ||||||||||||||| ||| ||||||| |||| |||| ||||| | ||| Sbjct 29183 GCATATTTAGGGTCAAAAACATGTGAAAGTACTTCTCTTCTAAAACCGTGGGAATATGAG 29124 Query 8206 AGCAAAATCCCGATCATCAAAAGAGCTACTCGATTAAGAGATGCCATTCATTGGTTTGTG 8265 | ||||| || | || | |||||| || |||||| | || | ||||||||||| Sbjct 29123 ACAAAAATACCATTAATTAGAAGAGCATCTGATTTAAGAAAGGCTTTCCATTGGTTTGTA 29064 Query 8266 GAGCCAAGCTCCAACTTGGCAAAGAGCATCTTGCAAAACATCACAGCACTAACAGGAGAA 8325 || || || ||||||| |||| || | | || | ||| ||||| || Sbjct 29063 GAACCTGAGTCAAACTTGGGAAAGTCAATAATCAATAATTTAGAAGCCCTAACTGGTATC 29004 Query 8326 GAGTGGGGATCATCACTA-GAAGGATTTAAGAGAACGGGGTCTGCTCTCCATAGATTTAC 8384 | |||| | | || | |||| || | ||| | || |||||||| ||| | |||| Sbjct 29003 AAATGGGAAGAAGCAGGATTAAGGGCTTTA-AGATCTGGCTCTGCTCTACATCGTTTTAG 28945 Query 8385 CACATCACGAATGAGCCATGGAGGCTTTTGTGCCCAAAGCCCGGCTGCATTG-ACAAGGA 8443 | || ||| |||||| ||||| | | ||||| || | | || || | ||| ||| Sbjct 28944 CTGCTCTCGACAGAGCCAAGGAGGTTATATTGCCC-AATCACCTCTCTATGGAACATGGA 28886 Query 8444 TGATGGCAACCACAGATACAATGAGCG-ACTATGCAAAAGACAATTATGATTTTATGTTC 8502 |||| |||| || ||||| ||| | | ||| | ||||| || | ||| || | || Sbjct 28885 TGATTACAACAACTGATACTATGGGTGAACTGGGTGAAAGA-AACTTTGACTTCCTATTT 28827 Query 8503 CAGGCTT 8509 ||||||| Sbjct 28826 CAGGCTT 28820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35363495136528