Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_022581.1 Length=11806 Score E Sequences producing significant alignments: (Bits) Value seq1802 194 1e-45 >seq1802 Length=132586 Score = 194 bits (214), Expect = 1e-45 Identities = 411/608 (68%), Gaps = 18/608 (3%) Strand=Plus/Minus Query 6800 CTTGATTATCGGACTGAAGGGAAAAGAGAGGGAACTaaaaaaaGCTGGACGGTTCTTTTC 6859 |||| |||||||| | ||| || ||| | || | |||| | || | || ||| | Sbjct 31080 CTTG-TTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGC 31022 Query 6860 TCTAATGTCCTGGGAATTGAGGGAGTATTTTGTAATAACTGAATACCTGATCAAAACTCA 6919 ||| ||||||||| |||| || || ||||| |||||||| |||| |||| ||| || Sbjct 31021 TCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCA 30964 Query 6920 TTACGTCCCTCTCTTTAAAGGATTGACCATGGCAGATGACATGACGGAGGTCGTCAAGAA 6979 || || || | ||| |||||||| |||||||||||| | | || | ||||| Sbjct 30963 TTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAA 30904 Query 6980 GATGTTAGAAAGAAGTCAAGGACAAGGAGAGGATGATTACGAGCACGTCAGCATTGCCAA 7039 ||||||||| | | || ||||| |||| || || | | | ||||| || Sbjct 30903 GATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAA 30844 Query 7040 CCACATTGATTATGAAAAATGGAACAACCATCAAAGGAAAGAGTCTAACGGCCCGGTGTT 7099 || ||| |||||||||| |||||||| |||||||| | || | ||| || || || Sbjct 30843 TCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTT 30784 Query 7100 CAGAGTCATGGGACAATTTCTGGGGTACCCTAGTTTGATAGAAAAGACCCATGACTTCTT 7159 || |||||||||||||||| | ||||| |||| |||||| |||||||| ||||| Sbjct 30783 CACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTT 30724 Query 7160 TGAGCAAAGCTTGATCTATTATAATGGCAGACCTGACTTGATGCAGACAG--ATGGAGAC 7217 | || || || ||||| || |||||||| | || ||||| || || | Sbjct 30723 CCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAAT---GACAGTTATAGAAGC 30667 Query 7218 GAGTTGCAAAACCGAACGGAAGCTTT------GGTGTGTTGGAATGGTCAGAAAGGAGGA 7271 ||| ||| | || || || | ||| || ||||||||||| ||||||| Sbjct 30666 TCGTTTAGAAAACAAA--GACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGA 30609 Query 7272 TTAGAAGGACTCAGGCAAAAAGGATGGAGCATCCTCAACCTGTTGGTCATCAAAAGAGAA 7331 |||| || || || ||||||||||| || ||| | | | | ||| ||||||||| Sbjct 30608 CTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGTTTA--TTATAAACATTAAAAGAGAA 30551 Query 7332 TCTAAAATCAGAAACACTAAAGTGCAAACTTTGGCCCAGGGAGACAATCAGGTAGTGTGT 7391 |||| | ||| || | | | | ||||| || ||||| ||||| || || ||| Sbjct 30550 GGTAAAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGT 30491 Query 7392 ACCCAATA 7399 || ||||| Sbjct 30490 ACTCAATA 30483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37660906420280