Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_022581.1
Length=11806
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 194 1e-45
>seq1802
Length=132586
Score = 194 bits (214), Expect = 1e-45
Identities = 411/608 (68%), Gaps = 18/608 (3%)
Strand=Plus/Minus
Query 6800 CTTGATTATCGGACTGAAGGGAAAAGAGAGGGAACTaaaaaaaGCTGGACGGTTCTTTTC 6859
|||| |||||||| | ||| || ||| | || | |||| | || | || ||| |
Sbjct 31080 CTTG-TTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGC 31022
Query 6860 TCTAATGTCCTGGGAATTGAGGGAGTATTTTGTAATAACTGAATACCTGATCAAAACTCA 6919
||| ||||||||| |||| || || ||||| |||||||| |||| |||| ||| ||
Sbjct 31021 TCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCA 30964
Query 6920 TTACGTCCCTCTCTTTAAAGGATTGACCATGGCAGATGACATGACGGAGGTCGTCAAGAA 6979
|| || || | ||| |||||||| |||||||||||| | | || | |||||
Sbjct 30963 TTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAA 30904
Query 6980 GATGTTAGAAAGAAGTCAAGGACAAGGAGAGGATGATTACGAGCACGTCAGCATTGCCAA 7039
||||||||| | | || ||||| |||| || || | | | ||||| ||
Sbjct 30903 GATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAA 30844
Query 7040 CCACATTGATTATGAAAAATGGAACAACCATCAAAGGAAAGAGTCTAACGGCCCGGTGTT 7099
|| ||| |||||||||| |||||||| |||||||| | || | ||| || || ||
Sbjct 30843 TCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTT 30784
Query 7100 CAGAGTCATGGGACAATTTCTGGGGTACCCTAGTTTGATAGAAAAGACCCATGACTTCTT 7159
|| |||||||||||||||| | ||||| |||| |||||| |||||||| |||||
Sbjct 30783 CACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTT 30724
Query 7160 TGAGCAAAGCTTGATCTATTATAATGGCAGACCTGACTTGATGCAGACAG--ATGGAGAC 7217
| || || || ||||| || |||||||| | || ||||| || || |
Sbjct 30723 CCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAAT---GACAGTTATAGAAGC 30667
Query 7218 GAGTTGCAAAACCGAACGGAAGCTTT------GGTGTGTTGGAATGGTCAGAAAGGAGGA 7271
||| ||| | || || || | ||| || ||||||||||| |||||||
Sbjct 30666 TCGTTTAGAAAACAAA--GACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGA 30609
Query 7272 TTAGAAGGACTCAGGCAAAAAGGATGGAGCATCCTCAACCTGTTGGTCATCAAAAGAGAA 7331
|||| || || || ||||||||||| || ||| | | | | ||| |||||||||
Sbjct 30608 CTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGTTTA--TTATAAACATTAAAAGAGAA 30551
Query 7332 TCTAAAATCAGAAACACTAAAGTGCAAACTTTGGCCCAGGGAGACAATCAGGTAGTGTGT 7391
|||| | ||| || | | | | ||||| || ||||| ||||| || || |||
Sbjct 30550 GGTAAAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGT 30491
Query 7392 ACCCAATA 7399
|| |||||
Sbjct 30490 ACTCAATA 30483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 37660906420280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |