Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq1802 212 4e-51 >seq1802 Length=132586 Score = 212 bits (234), Expect = 4e-51 Identities = 760/1162 (65%), Gaps = 46/1162 (4%) Strand=Plus/Minus Query 5655 TCAAAATAGCTGGCCAAC--CATGGCTCAAATACTGGACTTTGGCGACAAATGGCATGAG 5712 |||||||| ||||| || ||| ||| || |||||||| || |||||||| Sbjct 31366 TCAAAATACATGGCCTACTCCATT--TCAGATCAGAGACTTTGGGGATCAATGGCATACT 31309 Query 5713 TTACCTTTGATCAAGTGTTTTGATATACCTGATCTGATAGATCCTTCTGTAATTTATGCT 5772 | ||||||| ||||||||||| || || ||| |||| |||||| | |||| |||||| Sbjct 31308 CTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCT 31249 Query 5773 GACAAGAGCCATTCAATGAACCGAAGTGAG--GTCATCCGCCATATATTGTACAAGTCTG 5830 || || ||||||||||| | | | | || | | ||| || | | | || | Sbjct 31248 GATAAAAGCCATTCAATCA--CTTAATCAGCAATTCTAGAGCATGTA-AGAAAATATCCG 31192 Query 5831 -ACACACCAATTCCATCCAGGAAGGTTATGAAAACGATGTTAGAGACA--CCCGCCACCA 5887 | | || || || || | |||||| | | || | ||| ||| ||||| || Sbjct 31191 AATATTCCGATCCCGTCAAAGAAGGTACTAGAGAC--TTTTATCAACAGTCCCGCAACAG 31134 Query 5888 ACTGGGTAGAATTCTT-AGAGAGCATCGACAAAGAAGGATTGGACCATGAAGACCTTATT 5946 | ||| | || || | |||| || | | | || || |||| ||| | ||| || Sbjct 31133 AATGGAAAACCTTTTTGAAAGAG-GTCAATGATCATGGTTTAGACCCGGAATATCTTGTT 31075 Query 5947 ATAGGCCTCAAAGCAAAGGAACGTGAGTTGAAAACCGTAGGTCGGTTCTTCTCTCTAATG 6006 || || | | ||||| || | | |||| ||||| | || || |||| ||| Sbjct 31074 ATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATG 31015 Query 6007 TCTTGGAAATTAAGAGAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTT 6066 || |||||||||||||| || ||||| ||||| | ||| | || || |||||||| Sbjct 31014 TCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTG 30957 Query 6067 CCTTTGTTTCACGGGCTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATG 6126 || |||||| || | || ||||| || ||||| | |||| | ||||| ||| | Sbjct 30956 CCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTA 30897 Query 6127 GAGTCATCTTCAGGACAAGGCGCCTCCGACTATGATGCCATTGCCATTGCGAACCATATT 6186 || | || || ||||| | ||||| || | ||||| || |||||| Sbjct 30896 GATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATT 30837 Query 6187 GACTATGAAAAATGGAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTC 6246 | |||||||| ||||| || |||||| | | ||| | || |||||| |||| |||| Sbjct 30836 AATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTC 30777 Query 6247 ATGGGTCAGTTCCTAGGGTATCCAAATTTAATTTACCGGACGCATGAGTTTTTTGAGAAT 6306 ||||| || || |||||||||| ||||| || | || || ||||| || || | Sbjct 30776 ATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCG 30717 Query 6307 AGCCTCATATATTACAATAACAGACCCGACCTGATGAGAGTGGTGAATAATACCGTGGAG 6366 || | || |||||||| || ||||| || || |||| ||| | | || ||| || Sbjct 30716 AGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGT--TATAGAAGCTCGTTTAG 30659 Query 6367 A----ACAGTTCTGATCAA-AGAGTCTGCTGGAATGGTCAGGCAGGGGGGCTCGAAGGAC 6421 | | || | || || || || |||||||||||||| ||||| || || || || | Sbjct 30658 AAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGC 30599 Query 6422 TGCGGCAAAAAGGATGGAGTATATTAAATTTGCTGGTGATAGCTAGGGAATCTCAGATTA 6481 || | ||||||||||| ||||| | ||| | || || ||| | | || Sbjct 30598 TGAGACAAAAAGGATGAAGTATCGTTTATT--ATAAACATTAAAAGAGAAGGTAAAGTTG 30541 Query 6482 GAAACAC----CTCTGTCAAAACTCTGGCACAGGGGGACAATCAGGTGATTTGCACTCAA 6537 ||| || || || | || |||| || || || ||||| || | || |||||| Sbjct 30540 AAAATACGAGACTTAGT---ATCT-TGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAA 30485 Query 6538 TATAAGACAAAAAATTATAGAAATGAG-AATGAATTAGTCTGCTTGT-TAGAACAGATTA 6595 ||||| || | | ||| | || |||||| ||| || ||| | || |||| Sbjct 30484 TATAA-ACTGCAGAAGATACGATCAAGCAATGAACTAG-ATGAATGTATCCAAAGAATTA 30427 Query 6596 AATTGAACAATCAGGCAATCATGGACGCAATAGAAACTGGGACGACCAAGCTGGGACTTA 6655 || ||||| | ||| ||| ||||||| || || | || ||| | Sbjct 30426 TATCAAACAACAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGT 30367 Query 6656 TTATAAATCAGGATGAAACGATGCAATCTGCGGATTATCTAAATTATGGGAAGGTTCCAA 6715 | || ||||| |||||||| ||| | || ||||||||| | ||||||||||||||||| | Sbjct 30366 TAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGA 30307 Query 6716 TATTTAGAGG---AGTCATCCGAGGTCTTGAATGCAAAAGATGGTCCAGAGTGACATGTG 6772 | ||| | || ||| | ||| | |||| |||||||||||| |||| ||||| Sbjct 30306 TTTTTCGTGGGAAAGTAA---AAGGGATGGAATCAAAAAGATGGTCC-GAGTAGCATGTA 30251 Query 6773 TCACCAATGATCAACTCCCGAC 6794 | | || |||||| | || || Sbjct 30250 TGTCTAACGATCAATTACCTAC 30229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34096399219584