Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025342.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq1802 196 3e-46 >seq1802 Length=132586 Score = 196 bits (216), Expect = 3e-46 Identities = 514/776 (66%), Gaps = 29/776 (4%) Strand=Plus/Minus Query 6261 GGGAAAGAGCGTGAAGTAAAAATTAAGGGACGATTCTTCTCTTTGATGTCTTGGAGATTG 6320 ||||| ||||| || | |||| | || |||| || || | ||||| |||| ||| Sbjct 31062 GGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTA 31003 Query 6321 AGGGAATATTTCGTTGTTACAGAATATCTTATAAAGGAGCATTTCGTCCCATTATTCAAT 6380 || || |||||||| | ||| |||| | || || | |||||| || ||||| || Sbjct 31002 AGAGATTATTTCGTAATAACA--ATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCG 30945 Query 6381 GGGTTGACAATGGCAGATGACATGACGACAGTGATATCGAAATTGATGGACAGAACCCAA 6440 || ||||| |||||||||||| | | || || || ||| || | || | | | Sbjct 30944 GGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAAT 30885 Query 6441 GGTCAGGGCGGAGAGGACTACACACAAATCTGCATCGCCAATCACATTGACTATGAAAAA 6500 ||||| || ||| | || | | || || || ||||| ||| | |||||||| Sbjct 30884 GGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAG 30825 Query 6501 TGGAACAATCATCAAAGAAAGGACGCCACCGGCCCTGTCTTTAAGGTCATGGGACAGTTC 6560 |||||||||||||||||| | || || | | ||||| || | ||||||||||| || Sbjct 30824 TGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTT 30765 Query 6561 TTGGGATTACCAAATTTAATCTATCGAACACATGAGTTCTTTGAACAGAGCTGGATTTAT 6620 || || | || ||||| |||| |||||| ||||| ||||| || ||| | |||||| Sbjct 30764 TTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTAT 30705 Query 6621 TATAATGGTAGGCCTGATTTGATGGCAGTTGTTGATGGGCGACTGATCAACTCTGGAACC 6680 || || ||| |||||| | ||| ||||| | || | || | | || || || Sbjct 30704 TACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCG-TTTAGAAAACAAAGACCC 30646 Query 6681 ----AATATAGTCTGTTGGGACGGTCAAGCTGGAGGGTTAGAAGGATTGAGACAGAAGGG 6736 || | || || ||| | |||||||| ||||| |||| || ||||||| || || Sbjct 30645 TATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGG 30586 Query 6737 TTGGACGGTTGTAGGACTCTTGATGATCAT---AAGAGAAGCTAGAGTTCGTAACACAGC 6793 || | ||| | | || | ||| |||||||| || |||| || || Sbjct 30585 ATGAA-----GTATCGTTTATTATAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAG 30531 Query 6794 TGTCAAAATTTTGGCTCAGGGAGACAACCAAGTGATCTGCACTCAGTATAAGCTCC---- 6849 | | || ||||| || ||||| || ||||| |||| ||||| ||||| || | Sbjct 30530 ACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAA 30471 Query 6850 --GCCCTTCAGAAAGTGAACTAGATCTGCGGGTCAATTTGCAGTCAATATGGGAGAACAA 6907 | ||| | |||||||||| | || | | | | |||| | ||||| Sbjct 30470 GATACGATCAAGCAATGAACTAGATGAATGTATCCA-AAGAATT--ATATCAAACAACAA 30414 Query 6908 TAATGCAATTATG-GCAGCTATCAATCAAGGAACGAATAAATTGGGATTGATTATTAATG 6966 ||| ||| ||| | | | || | ||||||| ||| | | |||||| | |||||| Sbjct 30413 TAA---AATAATGAGTAAC-ATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTAATC 30358 Query 6967 AGGACGAAACTATGCAGTCTGCAGATTATTTAAATTATGGAAAGATTCCGGTCTTT 7022 | || ||||| ||| |||| || |||||||| |||||||| ||| ||||| | ||| Sbjct 30357 AAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTT 30302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35465886725776