Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_025353.1
Length=11070
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 370 7e-99
>seq1802
Length=132586
Score = 370 bits (410), Expect = 7e-99
Identities = 931/1400 (67%), Gaps = 30/1400 (2%)
Strand=Plus/Minus
Query 5705 AGATCTAACTCTAGTTGTTTACGGGTCTTTCAGGCATTGGGGCCATCCCTTCATCGATTA 5764
|||||| ||| ||||||||||| || || || |||||||| ||||| || | || ||
Sbjct 31612 AGATCTTGTTCTTGTTGTTTACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTA 31553
Query 5765 TTATGAAGGTTTGAAGAAGTTACATCATCAAGTAACTATGCCTAAGACTATCGACAAAGG 5824
| |||| | || ||||||||| | ||| |||| | || || || || | |
Sbjct 31552 TCTACAAGGACTCAAAAAGTTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAG 31493
Query 5825 CTATGCGGCGGCGTTAGCAAGTGATCTGGCACGGATTGTTTTGCAGCAACAATTCAGTGA 5884
|||||| ||| ||||||||||| | |||| ||||| ||| || | |||||| |
Sbjct 31492 ATATGCGCAGGCATTAGCAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAA 31433
Query 5885 AAACAAAAAATGGTTTGTGGATA--AATCCGCAATTCCTAAGAAA-CATCCTTTTTATAA 5941
||| || | |||| || || | |||| ||| | || | | || ||| | ||| |
Sbjct 31432 AAAGAAGATTTGGTCAGTTGAAACCAATCT---ATTGCGAAAAGATCACCCTCTATATGA 31376
Query 5942 CCACATCACAGAAAACACTTGGCCTACAGCAGCCCAAATACAAGACTTTGGAGATCACTG 6001
| || || |||| || |||||||| || || || ||||||||| ||||| ||
Sbjct 31375 CTCAATTACTCAAAATACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATG 31316
Query 6002 GCATGAATTACCTTTGACGAAGTGTTTTGAAATCCCTGATCTTATTGATCCATCAATCAT 6061
|||| | ||||||| ||||||||||| ||||| ||| | || ||||| | ||
Sbjct 31315 GCATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAAT 31256
Query 6062 ATATTCAGACAAGAGTCATTCCATGAATAGATCTG-ATGTCTTGAGGCATGTTCGCAATT 6120
||| | || || || ||||| || | | ||| | | ||| ||| ||||| | || |
Sbjct 31255 CTATGCTGATAAAAGCCATTCAATCACTTAATCAGCAATTCTAGAG-CATGTAAGAAAAT 31197
Query 6121 CTCCAAACACTCCCATTCCAAGCAGAAAGGTGTTGCAGACAATGCTTGAAACAAAGGCAA 6180
||| || | ||| || || | ||||| | |||| | | | | ||||
Sbjct 31196 ATCCGAATATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAA 31137
Query 6181 CAAATTGGGGAGAATTTTTGTCA----TCAATAGACAAATATGGCTTAGAACTGGAAGAT 6236
|| | ||| | |||||| | ||||| || ||| ||||| | |||| ||
Sbjct 31136 CAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCA----TGGTTTAGACCCGGAATAT 31081
Query 6237 TTGGTCATCGGGCTGAAAGGGAAAGAACGAGAATTAAAATTGGCCGGCAGAtttttttCT 6296
| || ||||| | ||||| || ||| || | ||| || ||||||||| ||
Sbjct 31080 CTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCT 31021
Query 6297 CTTATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTAATAAAGACACAT 6356
|||||||||||||| || ||||| |||||||| || || | ||||| || || |||
Sbjct 31020 CTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCAT 30963
Query 6357 TTTGTCCCCATGTTTAAGGGATTGACAATGGCAGATGATCTAACAGCTGTCATAAAGAAA 6416
||||| || ||||| ||||||||| ||||||||||| || | |||| |||||||
Sbjct 30962 TTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAG 30903
Query 6417 ATGATGGATACCTCATCAGGACAGGGTTTGGATAATTACGACTCAATTTGCATAGCCAAT 6476
||| | ||||| || || || || || ||| || || | || || || |||
Sbjct 30902 ATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAAT 30843
Query 6477 CACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATCCAATGGTCCTGTTTTT 6536
|| ||| ||||||| |||||||||||||| || | | ||| | || |||||||||
Sbjct 30842 CATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTC 30783
Query 6537 AGGGTAATGGGACAATTCCTTGGCTACCCCAATTTGATTGAACGCACCCATGAATTCTTT 6596
| || ||||||||||| | || || || |||||||| || ||||||||||||||
Sbjct 30782 ACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTC 30723
Query 6597 GAAAAAAGTCTGATTTACTATAATGGACGTCCAGACCTGATGCGAGTAAACGGAAACAC- 6655
|| ||| | ||||| || || | || || || ||| ||| | ||| | |
Sbjct 30722 CAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGT-TATAGAAGCTCG 30664
Query 6656 CTTAGAAAACAGAACACCTCTCAA---CGTTTGTTGGCAAGGTCAAGCTGGAGGCTTAGA 6712
|||||||||| | ||| | || ||||| ||| | |||||||| ||||| ||||
Sbjct 30663 TTTAGAAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGA 30604
Query 6713 GGGGCTTAGACAAAAAGGATGGAGCATCCTGAATCTTCTTGTGATTCAAAGAGAAGCAAA 6772
|||||| |||||||||||||| || ||| | | || | ||| ||||||||| ||
Sbjct 30603 GGGGCTGAGACAAAAAGGATGAAGTATC--GTTTATTATAAACATTAAAAGAGAAGGTAA 30546
Query 6773 GATTCGAAATACAGCGGTCAAGGTGCTAGCTCAGGGAGACAATCAGGTCATTTGCACGCA 6832
|| |||||| | | | | || || ||||| ||||| || | || || ||
Sbjct 30545 AGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCA 30486
Query 6833 ATATAAAACAAAAAAGGCCCGAAATGACGCA--GAACTTCTGGGAGCTCTACAACAAATG 6890
||||||| | ||| || || | ||| ||||| | | | | ||| |||
Sbjct 30485 ATATAAACTGCAGAAGATACG--ATCAAGCAATGAACTAGATGAATGTATCCAAAGAATT 30428
Query 6891 GTAAGTAATAATGAAAGTATAATGCTTGCCATCAAGCAAGGAACTGAAAAATTAGGTTTA 6950
|| || || | | |||||| | ||| | |||||||| | | | || ||
Sbjct 30427 ATATCAAACAACAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTG 30368
Query 6951 CTGATAAATGATGATGAGACAATGCAGTCCGCTGATTACCTCAACTACGGGAAAATTCCA 7010
| || ||| | ||||| || ||| |||| || ||||| | || || ||||| ||||
Sbjct 30367 TTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCG 30308
Query 7011 ATATTCCGTGGTGTTATACGAGGGTTAGAGACAAAAAGATGGTCTCGAGTCACATGTGTT 7070
|| || ||||| || |||| | || ||||||||||||| ||||| ||||| |
Sbjct 30307 ATTTTTCGTGGGAAAGTAAAAGGGATGGAATCAAAAAGATGGTC-CGAGTAGCATGTATG 30249
Query 7071 ACGAACGATCAAATCCCAAC 7090
| ||||||||| | || ||
Sbjct 30248 TCTAACGATCAATTACCTAC 30229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35305899867576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |