Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025354.1 Length=13169 Score E Sequences producing significant alignments: (Bits) Value seq1802 143 2e-30 >seq1802 Length=132586 Score = 143 bits (158), Expect = 2e-30 Identities = 249/352 (71%), Gaps = 14/352 (4%) Strand=Plus/Minus Query 8473 GGGGAAGGAAAGAGAGCTAAAAATAATTGGGAGATATTTCGCTCTACTCTCATGGGACTT 8532 ||||||||| || | | |||| ||| || |||| ||| ||||| | || ||| | || Sbjct 31063 GGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATT 31004 Query 8533 GCGGGATTATTTTGTTGCAACAGAATATCTGATCAAAAAGTACATCGTCCCCTA--TTTC 8590 | |||||||| || |||| |||| |||| ||| | | | || || | |||| Sbjct 31003 AAGAGATTATTTCGTAATAACA--ATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTC 30946 Query 8591 GGAGGACTTACCATGGCAGACGATCTGTTAGGA--GTAATAAAGAAAATGCTCAGCAACG 8648 || || | || |||||||| || || || | ||| ||||||| ||| | || || Sbjct 30945 GG--GATTGACTATGGCAGATGACCT--TAATACTGTATTAAAGAAGATGTT-AGATACT 30891 Query 8649 -CGCAAGGTCAAGGAAGAGATGATTATGAGATGATAACAATAGCTGATCACATTGATTAT 8707 || | |||||||| ||||| ||||| |||||||| ||| |||| ||| ||||| Sbjct 30890 TCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTAT 30831 Query 8708 GAAAAATGGAACAACCATCAAAGAGAAGAATCGAATCGGTCC-GTCTTCCAAGTAATGGA 8766 ||||| |||||||| ||||||||||| ||| |||| | ||| || ||| ||| |||| Sbjct 30830 GAAAAGTGGAACAATCATCAAAGAGATGAAGCGAA-CAATCCTGTTTTCACAGTCATGGG 30772 Query 8767 CAAATTCTTGGGTTACAACAACTTGATCTCTAGAACTCATCAAGTTTTCCAA 8818 |||| || || || || ||||||||| |||| ||| || | |||||| Sbjct 30771 ACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAA 30720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42018852560916