Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_025356.1
Length=11097
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 221 9e-54
>seq1802
Length=132586
Score = 221 bits (244), Expect = 9e-54
Identities = 740/1137 (65%), Gaps = 26/1137 (2%)
Strand=Plus/Minus
Query 6018 TACTTGGCCAACTGCGGCACAGATTCAAGACTTTGGGGACAGATGGAATCAATTGCCATT 6077
||| ||||| ||| | ||||| |||||||||||| |||| || | || ||
Sbjct 31360 TACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATACTCTTCCTTT 31301
Query 6078 GACCAAGTGTTTTGAAATCCCTGATTTATTAGACCCTTCCGTTATTTACTCAGACAAAAG 6137
|| ||||||||||| ||||| ||| | | || ||| | || || | || |||||
Sbjct 31300 GAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAG 31241
Query 6138 TCATTCCATGAATAGGAGAGAAGTCTTAGATCACGTCACAGCAGCACCGAACAAGCCCAT 6197
||||| || | | || | | |||| || || | | | ||||| | || ||
Sbjct 31240 CCATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGAT 31181
Query 6198 CCCAAGCAAGAAAGTATTAGAGACCATGCTGAACAATCCTGCCACAGACTGGCCATCTTT 6257
||| ||||| ||| ||||||| | | |||| ||| || ||||| ||| | | ||
Sbjct 31180 CCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTT 31121
Query 6258 TCTGAAATCTGTGGATGAAGAAGGATTAC-CCCGTGATAGTCTCATAATAGGACTAAAAG 6316
| ||||| || |||| | || ||| |||| ||| ||| | || ||| || |
Sbjct 31120 TTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATA-TCTTGTTATCGGATTACGGG 31062
Query 6317 GGAAAGAAAGAGAATTGAAAATCGCCGGAAGATTCTTTTCCCTGATGTCCTGGCAACTGA 6376
|||| || || || | |||| || ||||| ||| | || ||||||||| || | |
Sbjct 31061 GGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAA 31002
Query 6377 GAGAATATTTTGTCATCACCGAGTACTTAATAAAGACTCATTATGTACCATTATTCAAAG 6436
|||| ||||| || || || | || || || || |||| ||| ||||| || |
Sbjct 31001 GAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGG 30944
Query 6437 GACTCACAATGGCGGATGATCTGACATCAGTTGTAAAGAAGATGTTGGACAACACGAATG 6496
|| | || ||||| ||||| || | | || ||||||||||||| || | ||||||
Sbjct 30943 GATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATG 30884
Query 6497 GACAAGGACTGGATGATTATTCATCGATTTGCATCGCCAATCACATCGACTATGAGAAGT 6556
| ||||| | |||| ||| || || || || ||||| || | ||||| ||||
Sbjct 30883 GTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGT 30824
Query 6557 GGAATAATCATCAGAGAAAAGAATCCAATGGGCCTGTGTTTCGAGTCATGGGGCAGTTTT 6616
|||| |||||||| ||| | ||| | || ||||| || ||||||||| || ||||
Sbjct 30823 GGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTT 30764
Query 6617 TGGGTTATCCCAGATTGTTTGAAAGAACCCATGAGTTTTTTGAATCAAGCCTCATTTACT 6676
| || ||||| | ||| | |||||||||| || || |||| || | ||||| |
Sbjct 30763 TAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATT 30704
Query 6677 ACAACGGCAGACCAGACTTGATGGATGTAAGAGGAGATTCGTT----GATCAATACCACT 6732
||||| ||||| || | ||| || | || || ||||| | ||| | ||
Sbjct 30703 ACAACAATAGACCTGATCTAATGACAGTTATAGAAG-CTCGTTTAGAAAACAAAGACCCT 30645
Query 6733 GAAAAGTTGGTGTGTTGGGAGGGTCAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGA 6792
||| ||| || ||| | ||||| || |||||| | || || ||||||||||||||
Sbjct 30644 ATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGA 30585
Query 6793 TGGAGTGTGCTGAATCTGTTAGTCATAAACAGGGAATCATCCATAAGAAATACAATCGTG 6852
|| ||| | | | | || ||| || || ||| | |||||| | |
Sbjct 30584 TGAAGTAT--CGTTTATTATAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGACTT 30527
Query 6853 AAAGTACTAGCGCAGGGAGACAATCAGGTCATCTGTACTCAATATAAA--ACAAAAAATT 6910
| | | ||||| ||||| ||||| || ||||||||||||||||| || || ||
Sbjct 30526 AGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAAGAT- 30468
Query 6911 ACAAGAACGAGGAA-GAGCTTAAAATGCTTTTATCTGCCATG--GTAGAT--AACAATCA 6965
| || | || || || || | ||| | |||| | | | || || ||||| |
Sbjct 30467 --ACGATCAAGCAATGAACT--AGATGAATGTATC--CAAAGAATTATATCAAACAACAA 30414
Query 6966 GACAATCATGAATAGTATCGTGACAGGGACAGGTAAGTTGGGATTGATCATAAATAATGA 7025
| ||| |||| || || | | ||| || | | |||||| | || ||| | ||
Sbjct 30413 TAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTAATCAAGA 30354
Query 7026 TGAGACCATGCAATCTGCAGATTACCTTAATTACGGAAAAATGCCAGTCTTCCGAGGAAT 7085
||| |||||| | || || ||||| | ||||| || || | || | || || || |
Sbjct 30353 TGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTCGTGGGAA 30294
Query 7086 CCTAAGAGGATTAGAGACTAAAAGATGGTCCAGGGTCACATGCATCACGAATGATCA 7142
||| ||| | || | |||||||||||| | || |||| || | || |||||
Sbjct 30293 AGTAAAAGGGATGGAATCAAAAAGATGGTCC-GAGTAGCATGTATGTCTAACGATCA 30238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35392292771004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |