Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq1802 174 1e-39 >seq1802 Length=132586 Score = 174 bits (192), Expect = 1e-39 Identities = 240/332 (72%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 7462 GAGAAATGAAACGAGTAGGAAGAtttttttCACTTATGTCTTGGGAACTGAGGGAGTATT 7521 || |||| ||| || |||| ||||||||| | |||||||| ||| || | || || |||| Sbjct 31052 GAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATT 30993 Query 7522 TTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTACCATTGTTTAAAGGCTTGACTA 7581 | ||| || |||| |||||||| ||||||||| ||||||||| || ||||||| Sbjct 30992 TCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTA 30935 Query 7582 TGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTGGAGTCATCAATGGGACAGGGGA 7641 |||| |||| | | || ||| ||||| ||||| || | || | || || ||| Sbjct 30934 TGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGT 30875 Query 7642 ATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTCGATTATGAGAAGTGGAACAACC 7701 || ||||| | | | |||||||| ||| | ||||||| ||||||||||| | Sbjct 30874 TAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATC 30815 Query 7702 ACCAAAGAAGATTGT-CAAATCAGGCAGTCTTTAGAGTCATGGGACAATTTTTAGGTTAC 7760 | |||||| ||| | || | | || || | ||||||||||||||||||||| || Sbjct 30814 ATCAAAGA-GATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTAT 30756 Query 7761 CCAAATTTGATAAGTCGCACCCATGAAttttt 7792 || |||||||| ||| ||||||||||| || Sbjct 30755 CCTAATTTGATCTCTCGAACCCATGAATTCTT 30724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39049592349456