Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025376.1 Length=11096 Score E Sequences producing significant alignments: (Bits) Value seq1802 165 6e-37 >seq1802 Length=132586 Score = 165 bits (182), Expect = 6e-37 Identities = 659/1026 (64%), Gaps = 21/1026 (2%) Strand=Plus/Minus Query 5782 TTTACGGATCATTTAGGCATTGGGGCCACCC-TTTCATCTCTTACTTTGAGGGTCTGCAA 5840 |||||||||||||||| |||||||| || || |||| | || || ||| || || Sbjct 31595 TTTACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTATCTACAAGGA-CTCAAA 31537 Query 5841 AAACTACATGACCAAGTAACACTCCCCAAACAAATTGACCGCGCATATGCTGAGGCATTG 5900 || ||||||| ||| ||| | ||| ||||| || |||||| ||||||| Sbjct 31536 AAGTTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAGATATGCGCAGGCATTA 31477 Query 5901 GCCAGCGATCTTGCATATACAGTATTACAGAGGAAGTTCTCAGAAGAGAAAAAATGGTAC 5960 || || || | ||| ||| || || ||| | ||| || |||| | |||| Sbjct 31476 GCAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAAAAAGAAGATTTGGTCA 31417 Query 5961 GTAGATCCAGATGGATTACCCGCACGACATCCTTTAAAAGAACACATTG---AAAATGGA 6017 || || | || ||| | | || ||| || | || ||| ||||| Sbjct 31416 GTTGAAACCAATCTATTGCGAAAAGATCACCCTCTATATGACTCAATTACTCAAAAT--- 31360 Query 6018 ACATGGCCTACAGCCGCTCAAACACAAGACTTTGGAGACAGGTGGAATCAGTTGCCACTG 6077 ||||||||||| | ||| | ||||||||| || ||| || | || || Sbjct 31359 ACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATACTCTTCCTTTG 31300 Query 6078 ACTAAATGCTTTGAAATACCCGATTTGTTGGATCCCTCTGTAATATATTCAGATAAGAGT 6137 | || || ||||| || |||||| || | ||||| | |||| ||| | ||||| || Sbjct 31299 AAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGC 31240 Query 6138 CACTCAATGAACAGACGAGAGGTTTTGGATCACGTAGCAACCACACCAAATAAACCAATT 6197 || ||||| | | || || | || || ||| || || |||| || || Sbjct 31239 CATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGATC 31180 Query 6198 CCCAGTAAAAAAGTATTGGAGACCATGCTAAATAACCCTGCTACAGATTGGCCATCCTTC 6257 || || || ||| | ||||| | | || | || || ||||| ||| | |||| Sbjct 31179 CCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTTT 31120 Query 6258 CTGAAGACAGTAGATGAAAAAGGGTT-GCCCCGTGACAGTCTCATCATAGGGTTAAAAGG 6316 |||| || |||| | || || | |||| | | ||| | || || ||| || Sbjct 31119 TTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATA-TCTTGTTATCGGATTACGGGG 31061 Query 6317 AAAGGAGAGAGAATTGAAAATTGCCGGAAGATTTTTCTCCCTAATGTCATGGCAGTTAAG 6376 |||||| || || | |||| || |||||||| | || ||||| ||| | ||||| Sbjct 31060 GAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAG 31001 Query 6377 GGAGTACTTCGTCATCACAGAGTACTTGATCAAAACACACTATGTCCCGTTGTTCAAGGG 6436 || || ||||| || ||| || ||||| ||| || | ||| || ||||| ||| Sbjct 31000 AGATTATTTCGTAATAACAA--TATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGG 30943 Query 6437 ACTGACGATGGCAGATGACCTTACATCCGTTGTGAAGAAGATGTTGGACAACACAAATGG 6496 | |||| |||||||||||||||| | || | ||||||||||| || | | ||||| Sbjct 30942 ATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGG 30883 Query 6497 ACAAGGATTGGATGACTACTCCTCTATCTGTATTGCCAACCACATTGACTACGAAAAATG 6556 ||||| || |||| || | ||| ||||| || || ||| | || ||||| || Sbjct 30882 TCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTG 30823 Query 6557 GAATAATCATCAGAGGAAAGAGTCTAATGGTCCAGTGTTTCGAGTAATGGGACAGTTTCT 6616 ||| |||||||| || | || | || ||| || || ||| |||||||| ||| | Sbjct 30822 GAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTT 30763 Query 6617 AGGGTATCCTAGACTGTTTGAAAGGACACATGAGTTCTTTGAGTCCAGCCTCATCTACTA 6676 ||||||||||| || | | || ||||| ||||| | || || | || || || Sbjct 30762 AGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTA 30703 Query 6677 CAATGGAAGACCAGACCTGATGGATGTGAGAGGGGATTCATTGATCAACACTACAGAC-- 6734 ||| ||||| || || ||| || | || | || || | || || | |||| Sbjct 30702 CAACAATAGACCTGATCTAATGACAGTTATAGAAG-CTCGTTTA-GAAAAC-AAAGACCC 30646 Query 6735 ----AAATTAGTGTGTTGGGAGGGACAAGCAGGAGGTCTGGAAGGATTGCGACAAAAAGG 6790 || || || ||| | || ||||||||||| || || || || |||||||||| Sbjct 30645 TATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGG 30586 Query 6791 ATGGAG 6796 ||| || Sbjct 30585 ATGAAG 30580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35389093033840