Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_025376.1
Length=11096
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 165 6e-37
>seq1802
Length=132586
Score = 165 bits (182), Expect = 6e-37
Identities = 659/1026 (64%), Gaps = 21/1026 (2%)
Strand=Plus/Minus
Query 5782 TTTACGGATCATTTAGGCATTGGGGCCACCC-TTTCATCTCTTACTTTGAGGGTCTGCAA 5840
|||||||||||||||| |||||||| || || |||| | || || ||| || ||
Sbjct 31595 TTTACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTATCTACAAGGA-CTCAAA 31537
Query 5841 AAACTACATGACCAAGTAACACTCCCCAAACAAATTGACCGCGCATATGCTGAGGCATTG 5900
|| ||||||| ||| ||| | ||| ||||| || |||||| |||||||
Sbjct 31536 AAGTTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAGATATGCGCAGGCATTA 31477
Query 5901 GCCAGCGATCTTGCATATACAGTATTACAGAGGAAGTTCTCAGAAGAGAAAAAATGGTAC 5960
|| || || | ||| ||| || || ||| | ||| || |||| | ||||
Sbjct 31476 GCAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAAAAAGAAGATTTGGTCA 31417
Query 5961 GTAGATCCAGATGGATTACCCGCACGACATCCTTTAAAAGAACACATTG---AAAATGGA 6017
|| || | || ||| | | || ||| || | || ||| |||||
Sbjct 31416 GTTGAAACCAATCTATTGCGAAAAGATCACCCTCTATATGACTCAATTACTCAAAAT--- 31360
Query 6018 ACATGGCCTACAGCCGCTCAAACACAAGACTTTGGAGACAGGTGGAATCAGTTGCCACTG 6077
||||||||||| | ||| | ||||||||| || ||| || | || ||
Sbjct 31359 ACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATACTCTTCCTTTG 31300
Query 6078 ACTAAATGCTTTGAAATACCCGATTTGTTGGATCCCTCTGTAATATATTCAGATAAGAGT 6137
| || || ||||| || |||||| || | ||||| | |||| ||| | ||||| ||
Sbjct 31299 AAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGC 31240
Query 6138 CACTCAATGAACAGACGAGAGGTTTTGGATCACGTAGCAACCACACCAAATAAACCAATT 6197
|| ||||| | | || || | || || ||| || || |||| || ||
Sbjct 31239 CATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGATC 31180
Query 6198 CCCAGTAAAAAAGTATTGGAGACCATGCTAAATAACCCTGCTACAGATTGGCCATCCTTC 6257
|| || || ||| | ||||| | | || | || || ||||| ||| | ||||
Sbjct 31179 CCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTTT 31120
Query 6258 CTGAAGACAGTAGATGAAAAAGGGTT-GCCCCGTGACAGTCTCATCATAGGGTTAAAAGG 6316
|||| || |||| | || || | |||| | | ||| | || || ||| ||
Sbjct 31119 TTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATA-TCTTGTTATCGGATTACGGGG 31061
Query 6317 AAAGGAGAGAGAATTGAAAATTGCCGGAAGATTTTTCTCCCTAATGTCATGGCAGTTAAG 6376
|||||| || || | |||| || |||||||| | || ||||| ||| | |||||
Sbjct 31060 GAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAG 31001
Query 6377 GGAGTACTTCGTCATCACAGAGTACTTGATCAAAACACACTATGTCCCGTTGTTCAAGGG 6436
|| || ||||| || ||| || ||||| ||| || | ||| || ||||| |||
Sbjct 31000 AGATTATTTCGTAATAACAA--TATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGG 30943
Query 6437 ACTGACGATGGCAGATGACCTTACATCCGTTGTGAAGAAGATGTTGGACAACACAAATGG 6496
| |||| |||||||||||||||| | || | ||||||||||| || | | |||||
Sbjct 30942 ATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGG 30883
Query 6497 ACAAGGATTGGATGACTACTCCTCTATCTGTATTGCCAACCACATTGACTACGAAAAATG 6556
||||| || |||| || | ||| ||||| || || ||| | || ||||| ||
Sbjct 30882 TCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTG 30823
Query 6557 GAATAATCATCAGAGGAAAGAGTCTAATGGTCCAGTGTTTCGAGTAATGGGACAGTTTCT 6616
||| |||||||| || | || | || ||| || || ||| |||||||| ||| |
Sbjct 30822 GAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTT 30763
Query 6617 AGGGTATCCTAGACTGTTTGAAAGGACACATGAGTTCTTTGAGTCCAGCCTCATCTACTA 6676
||||||||||| || | | || ||||| ||||| | || || | || || ||
Sbjct 30762 AGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTA 30703
Query 6677 CAATGGAAGACCAGACCTGATGGATGTGAGAGGGGATTCATTGATCAACACTACAGAC-- 6734
||| ||||| || || ||| || | || | || || | || || | ||||
Sbjct 30702 CAACAATAGACCTGATCTAATGACAGTTATAGAAG-CTCGTTTA-GAAAAC-AAAGACCC 30646
Query 6735 ----AAATTAGTGTGTTGGGAGGGACAAGCAGGAGGTCTGGAAGGATTGCGACAAAAAGG 6790
|| || || ||| | || ||||||||||| || || || || ||||||||||
Sbjct 30645 TATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGG 30586
Query 6791 ATGGAG 6796
||| ||
Sbjct 30585 ATGAAG 30580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35389093033840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |