Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025392.1 Length=11121 Score E Sequences producing significant alignments: (Bits) Value seq1802 253 1e-63 >seq1802 Length=132586 Score = 253 bits (280), Expect = 1e-63 Identities = 558/822 (68%), Gaps = 26/822 (3%) Strand=Plus/Minus Query 6306 AGGTAGATTCTTTTCATTGATGTCATGGAAATTGCGAGAATATTTTGTGATAACCGAATA 6365 ||||||||| ||| | | ||||| |||||||| |||| ||||| || ||||| |||| Sbjct 31036 AGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATA 30979 Query 6366 TCTGATCAAAACGCATTTTGTCCCTCTCTTTTATGGACTCACCATGGCTGATGATATGAC 6425 | |||| ||| ||||||||| || | |||| ||| | || ||||| ||||| | | Sbjct 30978 TTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAA 30919 Query 6426 TTCAGTCATCAAGAAAATGCTAGAAAGTTCATCCGGTCAAGGGTTGAATGACTATTCTGC 6485 | | || | ||||| ||| |||| | ||| ||||||||||| ||| ||| Sbjct 30918 TACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATA 30859 Query 6486 AATCTCAATCGCAAATCACATAGATTATGAGAAATGGAACAATCACCA--GAGAAGAACA 6543 || |||| || ||||| || ||||||| || ||||||||||| || |||| ||| Sbjct 30858 TATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAG- 30800 Query 6544 TCAAACGAACCTGTATTCAAAGTGATGGGACAATTTCTGGGATATCCAAATTTGATATCA 6603 | ||| | ||||| |||| ||| |||||||||||| | || ||||| |||||||| || Sbjct 30799 -CGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCT 30741 Query 6604 CGCACCCATGAATTCTTTGAGAAGAGTTTGATTTATTATAATGGAAGACCCGATTTGATG 6663 || |||||||||||||| | |||||| |||||||| || ||||| ||| | ||| Sbjct 30740 CGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATG 30681 Query 6664 AGAGTCCGGAATGGAG-TGGTTGAGAATTCCTCAGATACT------AGAGTATGTTGGAA 6716 | ||| | | || | ||| |||| | ||| || || || || ||||| Sbjct 30680 ACAGT---TATAGAAGCTCGTTTAGAA-AACAAAGACCCTATGAAGAGGGTTTGCTGGAA 30625 Query 6717 TGGACAAGCCGGGGGTCTAGAGGGTTTGAGACAGAAGGGCTGGAGCATCCTAAATTTGTT 6776 ||| ||||| || || |||||||| ||||||| || || || || ||| | ||| | Sbjct 30624 TGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGTTTATT--AT 30567 Query 6777 GGTTATACAGAGGGAATCCAAAATCCGTAATACATCTGTCAAGGTATTGGCACAAGGAGA 6836 || | || ||| ||| | ||||| | | | ||||| |||||||| Sbjct 30566 AAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGA 30507 Query 6837 CAATCAAGTAATTTGTACCCAATACAAGACTAAACAACAT-CGCTCGGAGATTGAGCTTA 6895 |||||||| | ||||| ||||| || ||| | || || || || | ||| | || Sbjct 30506 TAATCAAGTTGTCTGTACTCAATATAA-ACTGCAGAAGATACGATCAAGCAATGAAC-TA 30449 Query 6896 GAGG--GGCATTGGAACAGATGAAGTCGAACAATCAAACAATAATGGATTCAATTGAGCG 6953 || | | || || | || | || ||||| | | ||||||| | || || Sbjct 30448 GATGAATGTATCCAAAGA-ATTATATCAAACAACAATAAAATAATGAGTAACATAGAAAA 30390 Query 6954 GGGAACAAACAGGCTTGGGCTTTTAATCAATCAAGATGAAACAATGCAATCGGCTGATTA 7013 ||||| || | || || | ||||| |||||||||||||| ||| | || || ||||| Sbjct 30389 AGGAACTAATCGACTCGGATTGTTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTA 30330 Query 7014 TCTTAATTACGGTAAAGTTCCAATCTTCCGAGGGGTCATACGAGGACTAGAGACTAAAAG 7073 | | ||||| || || ||||| || || || ||| || ||| | || | ||||| Sbjct 30329 TTTGAATTATGGGAAGGTTCCGATTTTTCGTGGGAAAGTAAAAGGGATGGAATCAAAAAG 30270 Query 7074 ATGGTCCAGGGTGACCTGCGTCACCAATGATCAACTGCCTAC 7115 ||||||| | || | || | | || |||||| | ||||| Sbjct 30269 ATGGTCC-GAGTAGCATGTATGTCTAACGATCAATTACCTAC 30229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35469086462940