Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025393.1 Length=11482 Score E Sequences producing significant alignments: (Bits) Value seq1802 109 4e-20 >seq1802 Length=132586 Score = 109 bits (120), Expect = 4e-20 Identities = 198/289 (69%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 6657 AAGGAGAGAGAACTTAAAAGGTTTGGAAGATTTTTTACTCTTATGACATGGGATCTTAGA 6716 |||||| || || ||||||| | || ||||||||| |||||||| | ||| | | ||| Sbjct 31059 AAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGA 31000 Query 6717 TTGTATTTTGTAATTTCGGAATATCTGATAAAAAAGGATTTAGTCAAAATGTTTGACGGT 6776 ||||| ||||| | ||||| |||| ||| | |||| || | ||||| || Sbjct 30999 GATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGA 30942 Query 6777 TTGACAATGGCTGATAGCTTTGTGGAAGTGATGAATAAAATGTTAAGCAGAACCCGTGGA 6836 ||||| ||||| ||| | || || | || || |||||| | | ||| Sbjct 30941 TTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGT 30882 Query 6837 CAAGCACACAACACATATGAAAACATTACATTTGCAAATCATATTGATTACAGTAAGTGG 6896 |||| | ||||||| | || ||| |||| ||||||||| |||| |||||| Sbjct 30881 CAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGG 30822 Query 6897 AACAATCATCAAAGGGATGAAGCTGTAGGTCCTGTTTTTTCAGTTATGG 6945 |||||||||||||| |||||||| ||||||||| |||| |||| Sbjct 30821 AACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGG 30773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36624191579144