Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_025394.1
Length=11103
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 289 2e-74
>seq1802
Length=132586
Score = 289 bits (320), Expect = 2e-74
Identities = 925/1406 (66%), Gaps = 54/1406 (4%)
Strand=Plus/Minus
Query 5732 TGTTCTTGTTATTTATGGCTCCTTCAGACATTGGGGGCATCCTTTCATTGACTACTTTCA 5791
|||||||||| |||| || || || ||||||||||||||||| || ||||||| | ||
Sbjct 31606 TGTTCTTGTTGTTTACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTATCTACA 31547
Query 5792 GGGACTAAAGAAGCTCCACACTCAAGTGACAATGAAAAAGACAATTGA-CACAGAGTACG 5850
||||| || ||| | || ||| || | || || || ||||| | ||| || |
Sbjct 31546 AGGACTCAAAAAGTTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAGA-TATG 31488
Query 5851 CGAATGCTTTGGCTAGTGATTTGGCTAGAATTGTACTCACAAAGGAATTCAATGAAAAGA 5910
|| | || || || ||||| || || ||||| | | || ||||| | ||||||
Sbjct 31487 CGCAGGCATTAGCAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAAAAAGA 31428
Query 5911 AACGTTGGAGTGTTGATTTTAATAGCGTTC--------CACCGTCCCATTTGTTCTACAA 5962
| |||| ||||| ||| | | |||| || || || || |||
Sbjct 31427 AGATTTGGTCAGTTGAAACCAATCTATTGCGAAAAGATCACCCTCT-ATATGA-CT-CAA 31371
Query 5963 CCATATCAAAGAGAATACATGGCCTACTCCCGCTCTCATACAAGACTTCGGAGATCATTG 6022
| ||||| |||||||||||||||| || || |||||| || ||||| ||
Sbjct 31370 TTAC-TCAAA----ATACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATG 31316
Query 6023 GCATGAATTACCACTTGTTCAGTGTTATGATATTCCGGATCTGATAGATCCTTCTATCAT 6082
|||| | || | |||||| ||| || || ||| |||| |||||| | | ||
Sbjct 31315 GCATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAAT 31256
Query 6083 TTACTCAGACAAAAGTCATTCAATGAACAGGAGATCTG---TGTTGGAGCATGTAAGGAA 6139
|| | || ||||| |||||||| || ||| | | | ||||||||||| ||
Sbjct 31255 CTATGCTGATAAAAGCCATTCAAT---CACTTAATCAGCAATTCTAGAGCATGTAAGAAA 31199
Query 6140 AAATCCAAACACTGTCATCCCCAGCAAAAAAGTATTGCAGACGATGATCG-CATCCCCTG 6198
| |||| || | | ||||| || || ||| | |||| | ||| || ||| |
Sbjct 31198 ATATCCGAATATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCC-G 31140
Query 6199 CAACAAATTGGATTGAATTCTTGGACATGGTCGATAAAGAAGGATTG---CCGGAAGATG 6255
||||| | |||| || ||| | |||| || | | || || |||||| ||
Sbjct 31139 CAACAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATAT- 31081
Query 6256 ATCTGGTAATTGGACTCAAAGGGAAGGAAAGGGAGTTGAAGATCGCAGGTCGATTCTTTT 6315
|| || || ||| | |||||||| | | | || | |||| |||| |||
Sbjct 31080 --CTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTG 31023
Query 6316 CGTTAATGTCTTGGAGATTACGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACAC 6375
| | ||||| |||| |||| | || || || ||||| || | |||||||||||| |
Sbjct 31022 CTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGC 30965
Query 6376 ACTTTGTTCCGTTATTTCATGGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaa 6435
| ||||| || || ||| |||||||||||||||||||| | | |||| | || |
Sbjct 30964 ATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGA 30905
Query 6436 aaaTGATGGAGAGTTCATCAGGTCAGGGTCTCAACGATTATTCTTCAATATGTCTGGCTA 6495
| ||| | || | ||| ||||| || | | | ||| | ||| | ||||
Sbjct 30904 AGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTA 30845
Query 6496 ATCACATTGATTATGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTT 6555
|||| ||| ||||||| || |||||||||||||| ||| | || | || |||||||
Sbjct 30844 ATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTT 30785
Query 6556 TCCGTGTCATGGGTCAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCT 6615
|| |||||||| || || || || | |||||| | || || | || ||||||||||
Sbjct 30784 TCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCT 30725
Query 6616 TTGAAAAAAGTCTGATATATTACAATGGGAGACCAGATTTGATGAAAGTGCAAGGAAATT 6675
| || ||| | || |||||||| ||||| ||| | |||| ||| || | |
Sbjct 30724 TCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTC 30665
Query 6676 CATTAGTCAATAACAG---CAAT-CAGCGGGTATGTTGGAACGGACAGGCAGGAGGTTTG 6731
|||| || || || | || || |||| || ||||| || || |||||||| |
Sbjct 30664 GTTTAGAAAACAA-AGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTA 30606
Query 6732 GAGGGCTTGAGGCAAAAGGGATGGAGTAT-TTTGAACCTATTGGTTATCCAGCGAGAATC 6790
||||| |||| ||||| ||||| ||||| || | || ||| | |||||
Sbjct 30605 GAGGGGCTGAGACAAAAAGGATGAAGTATCGTTTATTATAAACATTA---AAAGAGAAGG 30549
Query 6791 CAAGATCAGAAATACCGCAGTGAAGGTGTTGGCACAGGGTGATAATCAAGTAATCTGTAC 6850
|| | |||||| | | | | ||||| || || ||||||||||| |||||||
Sbjct 30548 TAAAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTAC 30489
Query 6851 TCAATACAAGACAAAACAACAT-CGAACTGACCATGAACTACGATCTGCATTGCTCCA-- 6907
|||||| || || | || || ||| | | |||||||| || || || ||||
Sbjct 30488 TCAATATAA-ACTGCAGAAGATACGATCAAGCAATGAACTA-GA--TGAATGTATCCAAA 30433
Query 6908 -AATGAAATTAAATAACGATTTCATCATGGAGGCA-ATTGAACACGGAACTGGAAAATTA 6965
||| | || ||| ||| || || || ||| | || ||| | |||||| | |
Sbjct 30432 GAATTATATCAAACAACAATAAAATAAT-GAGTAACATAGAAAAAGGAACTAATCGACTC 30374
Query 6966 GGACTCTTGATAAACCAGGACGAGACTATGCAATCAGCTGATTATTTGAATTATGGGAAA 7025
||| | || || || || || || || ||| | ||||| ||||||||||||||||||||
Sbjct 30373 GGATTGTTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAG 30314
Query 7026 GTTCCCATTTTCAGAGGTGTCATTAGAGGGTTAGAAACTAAAAGATGGTCTCGGGTAACA 7085
||||| ||||| | || | | |||| | ||| | ||||||||||| || ||| ||
Sbjct 30313 GTTCCGATTTTTCGTGGGAAAGTAAAAGGGATGGAATCAAAAAGATGGTC-CGAGTAGCA 30255
Query 7086 TGTGTGACAAATGATCAGTTGCCTAC 7111
||| || | || ||||| || |||||
Sbjct 30254 TGTATGTCTAACGATCAATTACCTAC 30229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35411491193988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |