Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025396.1 Length=15442 Score E Sequences producing significant alignments: (Bits) Value seq1802 168 7e-38 >seq1802 Length=132586 Score = 168 bits (186), Expect = 7e-38 Identities = 651/1009 (65%), Gaps = 28/1009 (3%) Strand=Plus/Minus Query 10515 CCTGCAACAAATTGGCCAGAATTTTTACAAAAAGTGAATGATCATGGATTAGATTGGGAG 10574 || |||||| | ||| | ||||| || | || ||||||||||| ||||| ||| Sbjct 31143 CCCGCAACAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAA 31084 Query 10575 AAGTTGGTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTC 10634 | | || || || ||| | ||||| || | ||||| | |||||| ||||| Sbjct 31083 TATCTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTT 31024 Query 10635 TCTTTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAA 10694 || | ||| | | |||||||| || || || ||| |||| |||||||| Sbjct 31023 GCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTG 30966 Query 10695 TATTATGTACCATTGTTTGAAGGACTTACAATGGCAGATGATTTGAACACTGTAATTAAA 10754 ||| ||| ||||||||| ||| | || ||||||||||| | || |||||| | || Sbjct 30965 CATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAG 30906 Query 10755 AAGATGCTGGACGTGTCATCCGGTCAAGGA--ACAAGAAACTATGATTATGTATCCATAG 10812 |||||| | || || |||||||| | | | | ||||| ||| || | || | Sbjct 30905 AAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGA--TATGAATATATAACAATTG 30848 Query 10813 CCAACAACATTGATTATGAGAAATGGAATAATTATCAAAGGAAAGAATCAAATGGACCGG 10872 | || | ||| ||||||| || ||||| ||| ||||||| | ||| | || || | Sbjct 30847 CTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTG 30788 Query 10873 TATTCAGAGTAATGGGACAATTCCTTGGAATGGAAAATCTTATAGTTCGGACACATGAAT 10932 | |||| ||| ||||||||||| | || ||| | || ||| || ||||||| Sbjct 30787 TTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAAT 30728 Query 10933 TCTTTGAAAATAGTTTGGTCTATTATAACCAGCGAGCAGACTTAATGATGGTGCAAGGGA 10992 |||| || ||||| | ||||| ||| | || | || |||||| || || Sbjct 30727 TCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAG--- 30671 Query 10993 GACATTGTTTAAATAAAACAG---GAATCAA---GGTGTGTTGGGAGGGTCAGAAGGGGG 11046 | | ||||| | || | || || || ||| || ||| | ||||| || | Sbjct 30670 AAGCTCGTTTAGAAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAG 30611 Query 11047 GATTAGAAGGGTTGAGGCAAAAAGGATGGAGTATATTGAATTATCTAATGATAGAGAGGG 11106 || |||| ||| |||| ||||||||||| ||||| | |||| ||| || | || | Sbjct 30610 GACTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGTTTATTA--TAAACATTAAAAGAG 30553 Query 11107 AGAGTAAGATAAGAAACACTAAGGTTAAAATTCTAGCTCAAGGGGACAATCAGACCATAA 11166 | |||| | ||| || | ||| || | || ||||| || ||||| | Sbjct 30552 AAGGTAAAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCT 30493 Query 11167 GTATGCATTACAAAACTGAAAGCTGGCAAAATGAAG--ATGAACTGAAAGAACACATACA 11224 ||| || || |||||| || | | || ||| ||||||| | ||| || || Sbjct 30492 GTACTCAATA-TAAACTG-CAGAAGATACGATCAAGCAATGAACTAGATGAATGTATCCA 30435 Query 11225 AAGAATGGTCGATAATAACAATCAAATAATGGATGCAATAATTGAAGGGACAAATAAGCT 11284 |||||| | || |||||| |||||||| | ||| |||| || ||| || Sbjct 30434 AAGAATTATATCAAACAACAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACT 30375 Query 11285 AGGACTTAGAATAAATCATGATGAGACCATGACTTCTGCAGATTACATAAATTACGGGAA 11344 ||| | ||| ||||| ||||| ||||||| || || ||||| | ||||| ||||| Sbjct 30374 CGGATTGTTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAA 30315 Query 11345 GGTTCCAATCATTGAAGGAACCATTCGTGGACTTCCAACCAAAAGATGGTCTAGAGTTAA 11404 |||||| || || || | | || | | | ||||||||||| |||| Sbjct 30314 GGTTCCGATTTTTCGTGGGAAAGTAAAAGGGATGGAATCAAAAAGATGGTC-CGAGTAGC 30256 Query 11405 TTTTACATCCAATGATCAATTACCCAGTACATCAACAATTTTAAACTCAA--GT-TCAAC 11461 | || || || ||||||||||| |||| || | | ||| ||| | || || | Sbjct 30255 ATGTATGTCTAACGATCAATTACC---TACAATAAGTAATATAATCTCTATGGTATCTTC 30199 Query 11462 TAATGCATTAACCGTAGCACACTTTAGTGAAAGACCTTTAGATGCAATT 11510 ||| |||||| | |||| |||||| ||| ||||| ||| ||||| Sbjct 30198 TAACGCATTATCTGTAGGGCACTTTTCAGAATCTCCTTTGGATTCAATT 30150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49291838539515