Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025397.1 Length=13203 Score E Sequences producing significant alignments: (Bits) Value seq1802 143 2e-30 >seq1802 Length=132586 Score = 143 bits (158), Expect = 2e-30 Identities = 347/514 (68%), Gaps = 21/514 (4%) Strand=Plus/Minus Query 8185 GAAGATCTTATTATCGGATTGAAGCCCAAGGAAAGAGAATTGAAACGAACCGGACGATAT 8244 ||| ||||| |||||||||| | ||||| || || | ||| ||| || ||| | Sbjct 31086 GAATATCTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTT 31027 Query 8245 TTCTCTCTTATGTCCTTTAACTTGAGACATTACTTTGTCATAACAGAATTATTGATCAAA 8304 || |||||||||||| || || ||| |||| || || ||||| ||| ||||| ||| Sbjct 31026 TTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAA 30969 Query 8305 GAGCACTTTGTTCCGTTGTTTTCTGGATTAACTATGGCTGATGATCTGCAAGAGT-TAAC 8363 | ||| ||||| || |||||||| ||||| |||||||| ||||| || || | | || Sbjct 30968 GTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCT-TAATACTGTATT 30910 Query 8364 aaaaaaaTTATTGGATA----GAAT-ATC-CGGGCAAAATGGGCCAGAAACTAATCGTAT 8417 ||| || | || |||| |||| || ||| | ||| || | ||| ||| Sbjct 30909 AAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATG-----GATATGAAT-ATAT 30856 Query 8418 AAATATTGCCAATGGTTTGGACTACACAAAATGGAATAATTACCAAAGAAGGGATTCTAA 8477 || ||||| ||| | | | || ||| ||||| ||| | |||||| || | || Sbjct 30855 AACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAA 30796 Query 8478 TAAATATGTCTTCAGAGTTATGGGACAATTTCTAGGTTATCCTTCACTCATTGAGAAAAC 8537 || ||| |||| ||| |||||||||||| |||| |||||| | || ||| Sbjct 30795 CAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAAC 30736 Query 8538 TCATGAATTCTTCGAAAAATCATTGATATATTACCCAGGGAGGCCAGACTTAATGGACAT 8597 |||||||||||| || || || |||||| || || || |||| |||| Sbjct 30735 CCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAAT-GACAG 30677 Query 8598 CCAAAATGGCAC-TTTAGTCAACAAAGGGAATATCAA---GGTTTGTTGGAATGGACAAA 8653 | | || | ||||| ||||||| ||| || |||||| |||||||| ||| Sbjct 30676 TTATAGAAGCTCGTTTAGAAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAG 30617 Query 8654 AAGGCGGGTTAGAGGGGTTGAGGCAAAAAGGGTG 8687 ||| || |||||||| |||| |||||||| || Sbjct 30616 CAGGAGGACTAGAGGGGCTGAGACAAAAAGGATG 30583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42127643376258