Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025400.1 Length=15444 Score E Sequences producing significant alignments: (Bits) Value seq1802 183 3e-42 >seq1802 Length=132586 Score = 183 bits (202), Expect = 3e-42 Identities = 673/1041 (65%), Gaps = 25/1041 (2%) Strand=Plus/Minus Query 10327 AGAATTTGGTGACCATTGGCATGAGCTTCCCTTAGACAAGTGTTTTGATATTCCTGATAT 10386 ||| ||||| || || |||||| ||||| || | ||||||||||| || || ||| | Sbjct 31333 AGACTTTGGGGATCAATGGCATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGT 31274 Query 10387 GATTGATATTAGCATATTGTATGCTGACAAAAGTCACTCTTTGGACCGGTCTGAAGTACT 10446 ||| ||| ||| || | |||||||| ||||| || || | || | | | || Sbjct 31273 GATCGATCCTAGTTTAATCTATGCTGATAAAAGCCATTCAATCACTTAATCAGCAATTCT 31214 Query 10447 AAAGGTTATCAGGGAGGGTAATCACAGACGGATTCCAACCAAGAGAGTTCTTCAAAGTTT 10506 | || | | || | | | | | ||| || | |||| || || | | ||| Sbjct 31213 AGAGCATGTAAGAAAATATCCGAATATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTT 31154 Query 10507 ATTGGATCGACCTGCAACAAATTGGCCAGAATTTTTACAAAGGGTGAATGATCATGGATT 10566 | | | || |||||| | ||| | ||||| || ||| ||||||||||| || Sbjct 31153 TATCAACAGTCCCGCAACAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTT 31094 Query 10567 AGATTGGGAGAAGTTGGTGATAGGTTTAAAAGCCAAAGAAAGGGAGCTTAAAGAAGAAGG 10626 ||| ||| | | || || || ||| | || || | | ||||| | ||| Sbjct 31093 AGACCCGGAATATCTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGG 31034 Query 10627 CAGGTTTTTCTCTTTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTT 10686 || ||||| || | ||| | | |||||||| || || || ||| |||| || Sbjct 31033 TAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTT 30976 Query 10687 GATCAAAAAATATTATGTACCATTATTCGAAGGACTTACAATGGCGGATGATTTGAATAC 10746 ||| ||| ||| ||| ||||| || ||| | || ||||| ||||| | ||||| Sbjct 30975 GATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATAC 30916 Query 10747 AGTCATCAAAAAGATGCTGGATGTGTCCTCCGGCCAAGGA--ACAAGAAACTATGATTAT 10804 || | || |||||| | ||| || || ||||| | | | | ||||| ||| Sbjct 30915 TGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGA--TATGAATAT 30858 Query 10805 GTGTCAATAGCTAACAATATTGATTATGAAAAATGGAATAATTATCAAAGAAAAGAATCA 10864 | |||| ||||| ||||| |||||||||| ||||| ||| |||||||| | ||| | Sbjct 30857 ATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCG 30798 Query 10865 AATGGACCAGTATTCAGAGTAATGGGGCAATTCCTTGGAATGGAAAATTTGATAGTTCGG 10924 || || || |||| ||| ||||| ||||| | || |||||||| ||| Sbjct 30797 AACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGA 30738 Query 10925 ACACATGAATTCTTTGAAAATAGTTTGGTTTATTATAACCAGCGAGCAGATTTAATGATG 10984 || ||||||||||| || ||||| ||||||| ||| | || | ||| |||||| Sbjct 30737 ACCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACA 30678 Query 10985 GTACAAGGAAGAAATTGTTT---AAACAGA-AC---AGGAACCAAGGTGTGTTGGGAGGG 11037 || | |||| | |||| ||||| | || | ||| | ||| || ||| | || Sbjct 30677 GT-TATAGAAG--CTCGTTTAGAAAACAAAGACCCTATGAA-GAGGGTTTGCTGGAATGG 30622 Query 11038 TCAAAAAGGGGGATTAGAGGGGCTGAGGCAAAAGGGATGGAGCATATTGAATTATTTAAT 11097 |||| ||| ||| ||||||||||||| ||||| ||||| || || | |||| ||| Sbjct 30621 TCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGTTTATTA--TAAA 30564 Query 11098 GATANNNNNNNNNNNTAAGATAAGAAATACCAAAGTTAAAATATTAGCTCAAGGAGACAA 11157 || ||| | |||||| | | ||| || || || |||||||| || Sbjct 30563 CATTAAAAGAGAAGGTAAAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAA 30504 Query 11158 TCAGACTATAAGTATGCATTACAAGACTGAAAGTTGGCAAGATGAAG--AGGAGCTGAGA 11215 ||| | | ||| || || || |||| || | | ||| ||| | || || ||| Sbjct 30503 TCAAGTTGTCTGTACTCAATATAA-ACTG-CAGAAGATACGATCAAGCAATGAACT-AGA 30447 Query 11216 -GAACACATACAGAGAATGGCTGAGAATAACAACCAAATAATGGATGCAATAATAGAAGG 11274 ||| || || ||||| || ||||| |||||||| | ||| | |||| Sbjct 30446 TGAATGTATCCAAAGAATTATATCAAACAACAATAAAATAATGAGTAACATAGAAAAAGG 30387 Query 11275 AACAAATAAGCTGGGACTTAGAATAAATCATGATGAGACCATGACTTCTGCAGATTACAT 11334 ||| ||| || ||| | ||| ||||| ||||| ||||||| || || ||||| | Sbjct 30386 AACTAATCGACTCGGATTGTTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATTT 30327 Query 11335 AAATTACGGGAAGGTTCCGAT 11355 ||||| |||||||||||||| Sbjct 30326 GAATTATGGGAAGGTTCCGAT 30306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49298237999241