Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_025405.1
Length=11124
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 154 1e-33
>seq1802
Length=132586
Score = 154 bits (170), Expect = 1e-33
Identities = 309/448 (69%), Gaps = 15/448 (3%)
Strand=Plus/Minus
Query 6253 AAGAGGTTAACGACCAGTGTTTCGAGAAAGATGATCTTATAATTGGATTGAGAGCAAAGG 6312
||||||| || || || |||| || || ||||| | || ||||| | | ||||
Sbjct 31115 AAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGGGGGAAGG 31056
Query 6313 AGAGAGAGTTGAAGAACAAAGGACGATTCTTTGCACTGATGTCTTGGAGACTTAGAGAAT 6372
|| || | | || | | ||| |||| ||||| || ||||| |||| | | ||||| |
Sbjct 31055 AGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATT 30996
Query 6373 ATTTTGTGGTCACAGAATATTTGATCAAAAAGCATTACATCCCTTTGTTCAAAGGCTTGA 6432
|||| || | ||| ||||||||| ||| ||||| | || ||||| || ||||
Sbjct 30995 ATTTCGTAATAACA--ATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGA 30938
Query 6433 CCATGGCGGATGATCTAAATACAGTAATAGAAAAGATGATTCAGAGCACAAGCGGTCATG 6492
| ||||| ||||| || ||||| ||| || | |||||| | | | | | ||||| |
Sbjct 30937 CTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAG 30878
Query 6493 ATAGAGAAG-ATAGCCGAAGACTTGTCACCGTCTGC-AACCATTTGGATTATGAAAAATG 6550
||| | ||| ||| | | | || | ||| || ||| | |||||||||| ||
Sbjct 30877 GGTTAGATGGATAT--GAATA--TATAACAAT-TGCTAATCATATTAATTATGAAAAGTG 30823
Query 6551 GAACAACAATCAAAGGGATGAGTCAAACCATGCGGTATTCAAAGTGATGGGCCAATTTTT 6610
|||||| ||||||| ||||| | ||| || | || |||| ||| ||||| ||||||||
Sbjct 30822 GAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTT 30763
Query 6611 AGGATTTCCCAATTTGATAACTAGAACCCATGAGATATTTCAGAAATC---CCTTATTTA 6667
||| | ||| |||||||| || |||||||||| || ||| |||| | |||||
Sbjct 30762 AGGGTATCCTAATTTGATCTCTCGAACCCATGA-ATTCTTC--CAATCGAGTTTAATTTA 30706
Query 6668 TTTTGTAAATAGACCAGACCTCATGACA 6695
|| |||||||| || || ||||||
Sbjct 30705 TTACAACAATAGACCTGATCTAATGACA 30678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35478685674432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |