Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025405.1 Length=11124 Score E Sequences producing significant alignments: (Bits) Value seq1802 154 1e-33 >seq1802 Length=132586 Score = 154 bits (170), Expect = 1e-33 Identities = 309/448 (69%), Gaps = 15/448 (3%) Strand=Plus/Minus Query 6253 AAGAGGTTAACGACCAGTGTTTCGAGAAAGATGATCTTATAATTGGATTGAGAGCAAAGG 6312 ||||||| || || || |||| || || ||||| | || ||||| | | |||| Sbjct 31115 AAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGGGGGAAGG 31056 Query 6313 AGAGAGAGTTGAAGAACAAAGGACGATTCTTTGCACTGATGTCTTGGAGACTTAGAGAAT 6372 || || | | || | | ||| |||| ||||| || ||||| |||| | | ||||| | Sbjct 31055 AGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATT 30996 Query 6373 ATTTTGTGGTCACAGAATATTTGATCAAAAAGCATTACATCCCTTTGTTCAAAGGCTTGA 6432 |||| || | ||| ||||||||| ||| ||||| | || ||||| || |||| Sbjct 30995 ATTTCGTAATAACA--ATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGA 30938 Query 6433 CCATGGCGGATGATCTAAATACAGTAATAGAAAAGATGATTCAGAGCACAAGCGGTCATG 6492 | ||||| ||||| || ||||| ||| || | |||||| | | | | | ||||| | Sbjct 30937 CTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAG 30878 Query 6493 ATAGAGAAG-ATAGCCGAAGACTTGTCACCGTCTGC-AACCATTTGGATTATGAAAAATG 6550 ||| | ||| ||| | | | || | ||| || ||| | |||||||||| || Sbjct 30877 GGTTAGATGGATAT--GAATA--TATAACAAT-TGCTAATCATATTAATTATGAAAAGTG 30823 Query 6551 GAACAACAATCAAAGGGATGAGTCAAACCATGCGGTATTCAAAGTGATGGGCCAATTTTT 6610 |||||| ||||||| ||||| | ||| || | || |||| ||| ||||| |||||||| Sbjct 30822 GAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTT 30763 Query 6611 AGGATTTCCCAATTTGATAACTAGAACCCATGAGATATTTCAGAAATC---CCTTATTTA 6667 ||| | ||| |||||||| || |||||||||| || ||| |||| | ||||| Sbjct 30762 AGGGTATCCTAATTTGATCTCTCGAACCCATGA-ATTCTTC--CAATCGAGTTTAATTTA 30706 Query 6668 TTTTGTAAATAGACCAGACCTCATGACA 6695 || |||||||| || || |||||| Sbjct 30705 TTACAACAATAGACCTGATCTAATGACA 30678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35478685674432