Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq1802 179 3e-41 >seq1802 Length=132586 Score = 179 bits (198), Expect = 3e-41 Identities = 413/615 (67%), Gaps = 13/615 (2%) Strand=Plus/Minus Query 6202 CCGATCCCTACAAGAAAAGTACTAAGAACATTATTGGAAAAACCAGCTACAGACTGGCCA 6261 |||||||| ||| || |||||| || || | | | || || ||||| ||| | Sbjct 31185 CCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAA 31126 Query 6262 TCATTCTTGAAAAGGATAGATGAAGAAGGTCTAAATGAAGAGGCTTTAGTCATAGGATTA 6321 | || |||||| | | |||| | ||| || | || | | || || |||||| Sbjct 31125 ACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTA 31066 Query 6322 AAAGGTAAGGAAAGAGAGCTGAAACAAGCAGGTAGATTCTTTTCATTGATGTCATGGGAG 6381 || ||||| || | | ||| | ||||||||| ||| | | ||||| ||| | Sbjct 31065 CGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAA 31006 Query 6382 TTACGAGAGTACTTTGTCATTACCGAATATTTAATAAAACACCATTTTGTACCTCTATTT 6441 ||| |||| || || || || || ||||||| || ||| |||||||| || | ||| Sbjct 31005 TTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTT 30948 Query 6442 AAGGGATTAACAATGGCAGATGATATGACAGAAGTGATCAAAAAGATGCTGGAAAGAAGT 6501 |||||| || ||||||||||| | | || | || |||||| | || | Sbjct 30947 TCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCG 30888 Query 6502 CAAGGCCAAGGAGAATTAGAC---TATCAACATGTGAGCATAGCGAACCATATAGATTAT 6558 | || ||||| ||||| ||| || || | | || || || ||||| ||||| Sbjct 30887 AATGGTCAAGGG---TTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTAT 30831 Query 6559 GAAAAGTGGAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCGTGTGATGGGC 6618 ||||||||||||||||||||||| | ||| | || || |||||| || ||||| Sbjct 30830 GAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGA 30771 Query 6619 CAATTCTTGGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTTGAGAAAAGTCTT 6678 ||||| || || ||||| |||||| |||| ||||| ||||| | ||| | Sbjct 30770 CAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTA 30711 Query 6679 GTTTATTACAATGGTAGACCAGACTTGATGA-AG--GTAGAAAATGGTGTAGTATTGAAT 6735 |||||||||| |||||| || | |||| || ||||| | || ||| | || Sbjct 30710 ATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTTTAGAAAACAA- 30652 Query 6736 AAAACAGAT-AATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTGAGACA 6794 | | | || || ||||||||||||||||||||||| || ||||||| |||||||| Sbjct 30651 AGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACA 30592 Query 6795 AAAAGGTTGGAGTAT 6809 |||||| || ||||| Sbjct 30591 AAAAGGATGAAGTAT 30577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35533081206220