Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_025406.1
Length=11141
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 179 3e-41
>seq1802
Length=132586
Score = 179 bits (198), Expect = 3e-41
Identities = 413/615 (67%), Gaps = 13/615 (2%)
Strand=Plus/Minus
Query 6202 CCGATCCCTACAAGAAAAGTACTAAGAACATTATTGGAAAAACCAGCTACAGACTGGCCA 6261
|||||||| ||| || |||||| || || | | | || || ||||| ||| |
Sbjct 31185 CCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAA 31126
Query 6262 TCATTCTTGAAAAGGATAGATGAAGAAGGTCTAAATGAAGAGGCTTTAGTCATAGGATTA 6321
| || |||||| | | |||| | ||| || | || | | || || ||||||
Sbjct 31125 ACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTA 31066
Query 6322 AAAGGTAAGGAAAGAGAGCTGAAACAAGCAGGTAGATTCTTTTCATTGATGTCATGGGAG 6381
|| ||||| || | | ||| | ||||||||| ||| | | ||||| ||| |
Sbjct 31065 CGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAA 31006
Query 6382 TTACGAGAGTACTTTGTCATTACCGAATATTTAATAAAACACCATTTTGTACCTCTATTT 6441
||| |||| || || || || || ||||||| || ||| |||||||| || | |||
Sbjct 31005 TTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTT 30948
Query 6442 AAGGGATTAACAATGGCAGATGATATGACAGAAGTGATCAAAAAGATGCTGGAAAGAAGT 6501
|||||| || ||||||||||| | | || | || |||||| | || |
Sbjct 30947 TCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCG 30888
Query 6502 CAAGGCCAAGGAGAATTAGAC---TATCAACATGTGAGCATAGCGAACCATATAGATTAT 6558
| || ||||| ||||| ||| || || | | || || || ||||| |||||
Sbjct 30887 AATGGTCAAGGG---TTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTAT 30831
Query 6559 GAAAAGTGGAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCGTGTGATGGGC 6618
||||||||||||||||||||||| | ||| | || || |||||| || |||||
Sbjct 30830 GAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGA 30771
Query 6619 CAATTCTTGGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTTGAGAAAAGTCTT 6678
||||| || || ||||| |||||| |||| ||||| ||||| | ||| |
Sbjct 30770 CAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTA 30711
Query 6679 GTTTATTACAATGGTAGACCAGACTTGATGA-AG--GTAGAAAATGGTGTAGTATTGAAT 6735
|||||||||| |||||| || | |||| || ||||| | || ||| | ||
Sbjct 30710 ATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTTTAGAAAACAA- 30652
Query 6736 AAAACAGAT-AATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTGAGACA 6794
| | | || || ||||||||||||||||||||||| || ||||||| ||||||||
Sbjct 30651 AGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACA 30592
Query 6795 AAAAGGTTGGAGTAT 6809
|||||| || |||||
Sbjct 30591 AAAAGGATGAAGTAT 30577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35533081206220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |