Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_028230.1 Length=12020 Score E Sequences producing significant alignments: (Bits) Value seq1802 192 4e-45 >seq1802 Length=132586 Score = 192 bits (212), Expect = 4e-45 Identities = 307/429 (72%), Gaps = 14/429 (3%) Strand=Plus/Minus Query 7128 GCAACAGATTGGAAAAAATTCTTCCAGCAAGTCAATGACGAAGGTTTA---CCAGATGAT 7184 |||||||| ||||||| || || | | |||||||| | |||||| || || || Sbjct 31140 GCAACAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGA--AT 31083 Query 7185 GTTTTGATAATCGGATTAAAAGCAAAAGAAAGGGAGATGAAAAGAATCGGAAGAtttttt 7244 | ||| || |||||||| | || || | | || |||||||| || ||||||||| Sbjct 31082 ATCTTGTTA-TCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTT 31024 Query 7245 tCATTAATGTCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaa 7304 | | ||||| ||| |||||||||| ||||| || || ||||| |||| ||| Sbjct 31023 GCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTG 30966 Query 7305 TATTATGTTCCATTATTCAAGGGATTGACAATGGCAGATGGA-TTAATGACAGTGGTGAA 7363 ||| ||| ||||| || ||||||||| |||||||||| ||||| || || | || Sbjct 30965 CATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAAT-ACTGTATTAAA 30907 Query 7364 GAAAATGATTGATTCATCATGCGGGCAAGGAA-ATCTAGATTACAACACTGTATCAATTG 7422 ||| ||| | ||| | || || ||||| | | ||| || | | || |||||| Sbjct 30906 GAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATA-TATAACAATTG 30848 Query 7423 CCAATCATATAGATTATACAAAGTGGAACAATCACCAGAGA-AGGAAGTCCAATCACCCT 7481 | |||||||| ||||| ||||||||||||||| || ||| | |||| | || | ||| Sbjct 30847 CTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAG-CGAACAATCCT 30789 Query 7482 GTTTTTACTGTGATGGGACAGTTTTTGGGGTACCCGAACCTGATCACTAGAACTCATGAG 7541 ||||| || || |||||||| ||||| ||||| || || ||||| || |||| ||||| Sbjct 30788 GTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAA 30729 Query 7542 TTCTTCGAA 7550 |||||| || Sbjct 30728 TTCTTCCAA 30720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38345650173376