Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028232.1
Length=11214
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 118 8e-23
>seq1802
Length=132586
Score = 118 bits (130), Expect = 8e-23
Identities = 316/472 (67%), Gaps = 21/472 (4%)
Strand=Plus/Minus
Query 6415 AAAATTATCGGGAGGTATTTCGCTCTCTTGTCATGGAAGTTGAGAGAATATTTTGTGATA 6474
|||| || || || | ||| ||||| |||| ||||| || ||||| ||||| || |||
Sbjct 31044 AAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATA 30985
Query 6475 ACAGAGTATTTGATCAAGACTAATTTCATTCACTTGTATGATGGTCTGACAATGGCAGAT 6534
||| |||||||| || |||| | | |||| | || |||| |||||||||
Sbjct 30984 ACAA--TATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGAT 30927
Query 6535 GATTTAAAAGGGGTCATGATGAAATTGCTCAGTAGGTCTGACGGTCAAGGG--ACATCAG 6592
|| | || || | | ||| || | || || | ||||||||| | || |
Sbjct 30926 GACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATG-G 30868
Query 6593 ATTACAGTAGCATAACCATTGCCAACCACATTGACTATTCTAAGTGGAACAATCATCAAA 6652
|| | || ||||| ||||| || || ||| | ||| |||||||||||||||||||
Sbjct 30867 ATATGAATAT-ATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAA 30809
Query 6653 GAAAAGAATCAAACAAATATGTCTTCCGAGTGATGGGTCAGTTCATGGGATATCCGAATT 6712
|| | ||| | ||||| ||| ||| ||| ||||| || || | || ||||| ||||
Sbjct 30808 GAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATT 30749
Query 6713 TGTTCGAAAGGACACACGAGTTTTTTGAAAAGAGCTTGATTTATTATGCAGGAGATAGAT 6772
|| || | || || || || || || ||| || |||||||| || | |||||
Sbjct 30748 TGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTA--CAACA-ATAGAC 30692
Query 6773 C---TCTCCTTAGAGCAACTAGTCGC-GGCATAGAACAAGCTACAAGCATCAGAAG---- 6824
| ||| | | || | ||| || | |||| || | | | | | ||||
Sbjct 30691 CTGATCTAATGACAGTTA-TAGAAGCTCGTTTAGA--AAACAAAGACCCTATGAAGAGGG 30635
Query 6825 -TTGTTGGAAAGGACAAGCAGGAGGACTAGAGGGCCTCAGACAAAAGGGCTG 6875
||| ||||| || |||||||||||||||||||| || |||||||| || ||
Sbjct 30634 TTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATG 30583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35766662019192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |