Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_028232.1 Length=11214 Score E Sequences producing significant alignments: (Bits) Value seq1802 118 8e-23 >seq1802 Length=132586 Score = 118 bits (130), Expect = 8e-23 Identities = 316/472 (67%), Gaps = 21/472 (4%) Strand=Plus/Minus Query 6415 AAAATTATCGGGAGGTATTTCGCTCTCTTGTCATGGAAGTTGAGAGAATATTTTGTGATA 6474 |||| || || || | ||| ||||| |||| ||||| || ||||| ||||| || ||| Sbjct 31044 AAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATA 30985 Query 6475 ACAGAGTATTTGATCAAGACTAATTTCATTCACTTGTATGATGGTCTGACAATGGCAGAT 6534 ||| |||||||| || |||| | | |||| | || |||| ||||||||| Sbjct 30984 ACAA--TATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGAT 30927 Query 6535 GATTTAAAAGGGGTCATGATGAAATTGCTCAGTAGGTCTGACGGTCAAGGG--ACATCAG 6592 || | || || | | ||| || | || || | ||||||||| | || | Sbjct 30926 GACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAGATG-G 30868 Query 6593 ATTACAGTAGCATAACCATTGCCAACCACATTGACTATTCTAAGTGGAACAATCATCAAA 6652 || | || ||||| ||||| || || ||| | ||| ||||||||||||||||||| Sbjct 30867 ATATGAATAT-ATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAA 30809 Query 6653 GAAAAGAATCAAACAAATATGTCTTCCGAGTGATGGGTCAGTTCATGGGATATCCGAATT 6712 || | ||| | ||||| ||| ||| ||| ||||| || || | || ||||| |||| Sbjct 30808 GAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATT 30749 Query 6713 TGTTCGAAAGGACACACGAGTTTTTTGAAAAGAGCTTGATTTATTATGCAGGAGATAGAT 6772 || || | || || || || || || ||| || |||||||| || | ||||| Sbjct 30748 TGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTA--CAACA-ATAGAC 30692 Query 6773 C---TCTCCTTAGAGCAACTAGTCGC-GGCATAGAACAAGCTACAAGCATCAGAAG---- 6824 | ||| | | || | ||| || | |||| || | | | | | |||| Sbjct 30691 CTGATCTAATGACAGTTA-TAGAAGCTCGTTTAGA--AAACAAAGACCCTATGAAGAGGG 30635 Query 6825 -TTGTTGGAAAGGACAAGCAGGAGGACTAGAGGGCCTCAGACAAAAGGGCTG 6875 ||| ||||| || |||||||||||||||||||| || |||||||| || || Sbjct 30634 TTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATG 30583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35766662019192