Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028235.1
Length=12994
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 259 4e-65
>seq1802
Length=132586
Score = 259 bits (286), Expect = 4e-65
Identities = 712/1078 (66%), Gaps = 20/1078 (2%)
Strand=Plus/Minus
Query 7944 AATACATGGCCTAATCAATATCAGATACAG-GAGTTTGGAGATAGGTGGCATACTTTGCC 8002
||||||||||||| || || |||||| ||| || ||||| ||| ||||||||| | ||
Sbjct 31362 AATACATGGCCTACTCCATTTCAGAT-CAGAGACTTTGGGGATCAATGGCATACTCTTCC 31304
Query 8003 TATAACACAAATCTACGAATTACCTGATGTTTTGGATCCCTCATTGATCTATTCAGACAA 8062
| | | | | | || | || ||||| | ||||| || |||||| | || ||
Sbjct 31303 TTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAA 31244
Query 8063 ATCCCATTCATTAAATAGGAATGAGG--TTATTGAATGGGTACGCCAAAATCCCTACCAA 8120
| ||||||| | | | ||| || || | || ||| | || |||| |
Sbjct 31243 AAGCCATTCAATCACTT--AATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATT 31186
Query 8121 CCTATTCCAACAAAACGTGTGTTACAAACATTATTAGAAAAACCTGAAACCAATTGGGTA 8180
|| || || |||| || || | || || | | | || | ||| | ||| |
Sbjct 31185 CCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAA 31126
Query 8181 TCATTTTTACAAAAGATAAATGATGAAGGGTTAGATTTGGATTCTCTAATTATTGGGTTA 8240
| ||||| || || | |||||| | || ||||| ||| | ||| |||| || |||
Sbjct 31125 ACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTA 31066
Query 8241 AAAGCCAAAGAAAGAGAAATGAAGAGAATTGGGAGAtttttttCATTAATGTCTTGGGAG 8300
| || || || |||| || ||||| || ||||||||| | | ||||| ||| |
Sbjct 31065 CGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAA 31006
Query 8301 TTGAGAGAATATTTTGTATATACAGAGTATTTAATAAAGGAGTATTTTGTTCCATTATTC 8360
|| ||||| ||||| ||| ||| | | ||||| || || | | ||||||| ||||| ||
Sbjct 31005 TTAAGAGATTATTTCGTA-ATA-ACAATATTTGATTAAAGTGCATTTTGTGCCATTGTTT 30948
Query 8361 CATGGCTTGACCATGGCAGATGACCTGCAGGAAGTTATTAAGAAAATGTTGGAGAATGTA 8420
|| ||||| |||||||||||||| | || | ||||| ||||| || | |
Sbjct 30947 TCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCG 30888
Query 8421 AGTGGACAAGGGTTGGATAATTACGAGTATATATCAATTGCGAATCATATTGATTATGAA 8480
| ||| |||||||| ||| || || |||||| ||||||| ||||||||| ||||||||
Sbjct 30887 AATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAA 30828
Query 8481 AAATGGAACAATCATCAACGATACGAATCTAATTGTCATATTTTTAAAGTTATGGGTCAA 8540
|| ||||||||||||||| || | ||| | || || | |||| | ||| ||||| |||
Sbjct 30827 AAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAA 30768
Query 8541 TGTTTTGGTCTTCCCAATTTGTTTTTACGTTCTCATGAATTTTTTCAAAAAAGCCTGATT 8600
| ||| || ||| |||||| | | || | |||||||| || ||| || | |||
Sbjct 30767 TTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATT 30708
Query 8601 TATTACAACCAACGACCTGATCTGATGATCCCCTTAGAAGACAGGCTGGAATCTATTGAT 8660
||||||||| | |||||||||| |||| |||||| | | ||| | ||
Sbjct 30707 TATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTTTAGAAAACAAAGAC 30648
Query 8661 CCCAGTCAACTTGTTTGTTGGAATGGTCAAGCTGGAGGATTGGAAGGATTGAGGCAAAAG 8720
|| | | ||||| |||||||||||||| |||||| | || || |||| |||||
Sbjct 30647 CCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAA 30588
Query 8721 GGTTGGTCAATTGTAAATCTACTTGTTATAGAAAGAGAATCCAAAATTAGGAATACGTTA 8780
|| || || || || || | || |||||||| ||| || |||||| |
Sbjct 30587 GGATGAAGTATCGTTTAT-TA-TAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGA 30530
Query 8781 GTCAAAATTTTGGCTCAAGGAGACAATCAGACCATCAGCACTTGTTATGAGATGGTAAGC 8840
| | || ||||| |||||||| ||||| || | ||| ||| | || |
Sbjct 30529 CTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAAG 30470
Query 8841 ACTTTTTCAATTGAGGAAGAGGATTTGGAA---ATTAATAAGATTGTTCAAAACAATAAT 8897
| |||| | ||| ||| ||| || | | ||| | |||||| |||
Sbjct 30469 ATACGATCAAGCAATGAACTAGAT---GAATGTATCCAAAGAATTATATCAAACAACAAT 30413
Query 8898 GCTGTCATGAAAGCAATTCGCAATGGGACTGAAAAACTAGGGTTGTTGATTAATGATGAT 8957
| |||| || || || ||| | ||| || ||||| |||||| | |||
Sbjct 30412 AAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTAATCAAGAT 30353
Query 8958 GAAACTATG--GTCAGTGCCGATTATTTAAATTATGGGAAAGTTCCTATATTTCGTGG 9013
||||| ||| |||| || |||||||| ||||||||||| ||||| || ||||||||
Sbjct 30352 GAAACCATGAAGTCA--GCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTCGTGG 30297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41462194171112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |